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Fluctuations are inherent to biological systems, arising from the stochastic nature of molecular interactions, and influence various aspects of system behavior, stability, and robustness. These fluctuations can be categorized as intrinsic,…

Molecular Networks · Quantitative Biology 2024-08-23 Manuel Eduardo Hernández-García , Mariana Gómez-Schiavon , Jorge Velázquez-Castro

At finite concentrations of reacting molecules, kinetics of diffusion-controlled reactions is affected by intra-reactant interactions. As a result, multi-particle reaction statistics cannot be deduced from single-particle results. Here we…

Statistical Mechanics · Physics 2019-08-23 Tal Agranov , Baruch Meerson

We theoretically investigated the temperature fluctuations of DNA close to denaturation and observed a strong enhancement of these fluctuations at the critical temperature. Although in a much lower frequency range, such a sharp increase was…

Biological Physics · Physics 2011-11-10 Marc Joyeux , Sahin Buyukdagli , Michael Sanrey

We analyse in detail Mott's variable range hopping in one dimension, expanding on earlier work by Raikh and Ruzin. We show that the large conductance fluctuations in disordered insulators result from a subtle interplay between purely…

Condensed Matter · Physics 2009-10-22 François Ladieu , Jean-Philippe Bouchaud

Molecular origin of the well-known specific heat anomaly in supercooled liquid water is investigated here by using extensive computer simulations and theoretical analyses. A rather sharp increase in the values of isobaric specific heat with…

Soft Condensed Matter · Physics 2013-04-02 Shinji Saito , Iwao Ohmine , Biman Bagchi

Heat fluctuation probability distribution function in Brownian transducers operating between two heat reservoirs is studied. We find, both analytically and numerically, that the recently proposed Fluctuation Theorem for Heat Exchange [C.…

Statistical Mechanics · Physics 2009-11-11 A. Gomez-Marin , J. M. Sancho

For the first time, new important features of the fluctuation electromagnetic interaction between a small conducting particle and a smooth surface of polarizable medium (both dielectric and metallic) are worked out. The particle is…

Other Condensed Matter · Physics 2009-03-06 G. V. Dedkov , A. A. Kyasov

Thermal fluctuations strongly modify the large length-scale elastic behavior of crosslinked membranes, giving rise to scale-dependent elastic moduli. While thermal effects in flat membranes are well understood, many natural and artificial…

Soft Condensed Matter · Physics 2013-02-19 Jayson Paulose , Gerard A. Vliegenthart , Gerhard Gompper , David R. Nelson

Recent experiments using fluorescence spectroscopy have been able to probe the dynamics of conformational fluctuations in proteins. The fluctuations are Gaussian but do not decay exponentially, and are therefore, non-Markovian. We present a…

Statistical Mechanics · Physics 2008-10-14 Arti Dua , R. Adhikari

Diverse physical systems are characterized by their response to small perturbations. Near thermodynamic equilibrium, the fluctuation-dissipation theorem provides a powerful theoretical and experimental tool to determine the nature of…

Statistical Mechanics · Physics 2020-03-25 Jeremy A. Owen , Todd R. Gingrich , Jordan M. Horowitz

We consider the effects of long-range temporal correlations in many-particle systems, focusing particularly on fluctuations about the typical behaviour. For a specific class of memory dependence we discuss the modification of the large…

Statistical Mechanics · Physics 2015-12-24 Rosemary J. Harris

Microorganisms live in environments that inevitably fluctuate between mild and harsh conditions. As harsh conditions may cause extinctions, the rate at which fluctuations occur can shape microbial communities and their diversity, but we…

Populations and Evolution · Quantitative Biology 2021-10-14 Shota Shibasaki , Mauro Mobilia , Sara Mitri

The role of thermal pressure fluctuations in the ejection of tightly packaged DNA from protein capsid shells is discussed in a model calculation. At equilibrium before ejection we assume the DNA is folded many times into a bundle of…

Mesoscale and Nanoscale Physics · Physics 2010-09-20 Michael J. Harrison

In addition to providing general constraints on probability distributions, fluctuation theorems allow to infer essential information on the role played by temperature in heat exchange phenomena. In this numerical study, we measure the…

Statistical Mechanics · Physics 2024-12-11 Massimiliano Semeraro , Antonio Suma , Giuseppe Negro

Two species with similar resource requirements respond in a characteristic way to variations in their habitat -- their abundances rise and fall in concert. We use this idea to learn how bacterial populations in the microbiota respond to…

Populations and Evolution · Quantitative Biology 2015-10-02 Charles K. Fisher , Thierry Mora , Aleksandra M. Walczak

We provide a critical overview of the $\Phi$ measure of fluctuations and correlations. In particular we show that its discriminating power is rather limited in situations encountered in experiment.

High Energy Physics - Phenomenology · Physics 2009-04-15 O. V. Utyuzh , G. Wilk , Z. Wlodarczyk

We investigate the probability distribution of the quantum fluctuations of thermodynamic functions of finite, ballistic, phase-coherent Fermi gases. Depending on the chaotic or integrable nature of the underlying classical dynamics, on the…

Mesoscale and Nanoscale Physics · Physics 2009-11-07 P. Leboeuf , A. G. Monastra

This contribution presents a review of our present theoretical as well as experimental knowledge of different fluctuation observables relevant to nuclear multifragmentation. The possible connection between the presence of a fluctuation peak…

Nuclear Experiment · Physics 2009-11-11 F. Gulminelli , M. D'Agostino

We analyse the impact of temperature on the diffusion coefficient of an inertial Brownian particle moving in a symmetric periodic potential and driven by a symmetric time-periodic force. Recent studies have revealed the low friction regime…

Statistical Mechanics · Physics 2023-06-28 I. G. Marchenko , V. Aksenova , I. I. Marchenko , J. Łuczka , J. Spiechowicz

Even in the steady-state, the number of biomolecules in living cells fluctuates dynamically; and the frequency spectrum of this chemical fluctuation carries valuable information about the mechanism and the dynamics of the intracellular…

Biological Physics · Physics 2018-08-21 Sanggeun Song , Gil-Suk Yang , Seong Jun Park , Ji-Hyun Kim , Jaeyoung Sung