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In this paper we adopt the familiar sparse, high-dimensional linear regression model and focus on the important but often overlooked task of prediction. In particular, we consider a new empirical Bayes framework that incorporates data in…

Statistics Theory · Mathematics 2020-07-28 Ryan Martin , Yiqi Tang

We propose a general algorithmic framework for Bayesian model selection. A spike-and-slab Laplacian prior is introduced to model the underlying structural assumption. Using the notion of effective resistance, we derive an EM-type algorithm…

Methodology · Statistics 2020-06-19 Youngseok Kim , Chao Gao

Modern instance-based model-agnostic explanation methods (LIME, SHAP, L2X) are of great use in data-heavy industries for model diagnostics, and for end-user explanations. These methods generally return either a weighting or subset of input…

Machine Learning · Computer Science 2019-12-03 Matt Chapman-Rounds , Marc-Andre Schulz , Erik Pazos , Konstantinos Georgatzis

By leveraging experience from previous tasks, meta-learning algorithms can achieve effective fast adaptation ability when encountering new tasks. However it is unclear how the generalization property applies to new tasks. Probably…

Machine Learning · Computer Science 2021-02-09 Tianyu Liu , Jie Lu , Zheng Yan , Guangquan Zhang

We develop an empirical Bayes (EB) algorithm for the matrix completion problems. The EB algorithm is motivated from the singular value shrinkage estimator for matrix means by Efron and Morris (1972). Since the EB algorithm is essentially…

Machine Learning · Statistics 2019-04-10 Takeru Matsuda , Fumiyasu Komaki

Empirical Bayes is a versatile approach to `learn from a lot' in two ways: first, from a large number of variables and second, from a potentially large amount of prior information, e.g. stored in public repositories. We review applications…

Methodology · Statistics 2018-03-19 Mark A. van de Wiel , Dennis E. te Beest , Magnus Münch

Bayesian predictive inference analyzes a dataset to make predictions about new observations. When a model does not match the data, predictive accuracy suffers. We develop population empirical Bayes (POP-EB), a hierarchical framework that…

Machine Learning · Statistics 2015-06-10 Alp Kucukelbir , David M. Blei

The empirical Bayes normal means (EBNM) model is important to many areas of statistics, including (but not limited to) multiple testing, wavelet denoising, and gene expression analysis. There are several existing software packages that can…

Computation · Statistics 2024-04-02 Jason Willwerscheid , Peter Carbonetto , Matthew Stephens

In clinical trials, there often exist multiple historical studies for the same or related treatment investigated in the current trial. Incorporating historical data in the analysis of the current study is of great importance, as it can help…

Methodology · Statistics 2021-02-02 Huaqing Jin , Guosheng Yin

High-dimensional longitudinal data is increasingly used in a wide range of scientific studies. To properly account for dependence between longitudinal observations, statistical methods for high-dimensional linear mixed models (LMMs) have…

Methodology · Statistics 2024-07-10 Anja Zgodic , Ray Bai , Jiajia Zhang , Peter Olejua , Alexander C. McLain

In the context of the expected-posterior prior (EPP) approach to Bayesian variable selection in linear models, we combine ideas from power-prior and unit-information-prior methodologies to simultaneously produce a minimally-informative…

Computation · Statistics 2015-04-27 Dimitris Fouskakis , Ioannis Ntzoufras , David Draper

In emergencies, high stake decisions often have to be made under time pressure and strain. In order to support such decisions, information from various sources needs to be collected and processed rapidly. The information available tends to…

Information Retrieval · Computer Science 2025-03-12 Moritz Schneider , Lukas Halekotte , Tina Comes , Daniel Lichte , Frank Fiedrich

The planning and conduct of animal experiments in the European Union is subject to strict legal conditions. Still, many preclinical animal experiments are only poorly designed. As a consequence, discoveries that are made in one animal…

Methodology · Statistics 2023-01-16 Theresa Unseld

BACKGROUND: Random-effects meta-analysis within a hierarchical normal modeling framework is commonly implemented in a wide range of evidence synthesis applications. More general problems may even be tackled when considering meta-regression…

Computation · Statistics 2022-12-27 Christian Röver , Tim Friede

In Bayesian analysis, the posterior follows from the data and a choice of a prior and a likelihood. One hopes that the posterior is robust to reasonable variation in the choice of prior and likelihood, since this choice is made by the…

Methodology · Statistics 2015-12-09 Ryan Giordano , Tamara Broderick , Michael Jordan

Robust Mixture Prior (RMP) is a popular Bayesian dynamic borrowing method, which combines an informative historical distribution with a less informative component (referred as robustification component) in a mixture prior to enhance the…

Methodology · Statistics 2026-03-18 Marco Ratta , Gaelle Saint-Hilary , Mauro Gasparini , Pavel Mozgunov

In variety testing, multi-environment trials (MET) are essential for evaluating the genotypic performance of crop plants. A persistent challenge in the statistical analysis of MET data is the estimation of variance components, which are…

Methodology · Statistics 2026-04-20 Stephan Bark , Waqas Ahmed Malik , Maryna Prus , Hans-Peter Piepho , Volker Schmid

We present a randomized maximum a posteriori (rMAP) method for generating approximate samples of posteriors in high dimensional Bayesian inverse problems governed by large-scale forward problems. We derive the rMAP approach by: 1) casting…

Computation · Statistics 2016-02-12 Kainan Wang , Tan Bui-Thanh , Omar Ghattas

This paper introduces a novel theoretically sound approach for the celebrated CMA-ES algorithm. Assuming the parameters of the multi variate normal distribution for the minimum follow a conjugate prior distribution, we derive their optimal…

Machine Learning · Computer Science 2019-04-03 Eric Benhamou , David Saltiel , Sebastien Verel , Fabien Teytaud

Empirical best prediction (EBP) is a well-known method for producing reliable proportion estimates when the primary data source provides only small or no sample from finite populations. There are potential challenges in implementing…

Methodology · Statistics 2025-01-22 Aditi Sen , Partha Lahiri