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We study maximal clades in random phylogenetic trees with the Yule-Harding model or, equivalently, in binary search trees. We use probabilistic methods to reprove and extend earlier results on moment asymptotics and asymptotic normality. In…

Probability · Mathematics 2014-08-28 Svante Janson

Tree containment problem is a fundamental problem in phylogenetic study, as it is used to verify a network model. It asks whether a given network contain a subtree that resembles a binary tree. The problem is NP-complete in general, even in…

Populations and Evolution · Quantitative Biology 2017-02-15 Andreas Gunawan

Multivariate decision trees are powerful machine learning tools for classification and regression that attract many researchers and industry professionals. An optimal binary tree has two types of vertices, (i) branching vertices which have…

Machine Learning · Computer Science 2024-08-05 Brandon Alston , Illya V. Hicks

A pebbling move on a graph removes two pebbles at a vertex and adds one pebble at an adjacent vertex. Rubbling is a version of pebbling where an additional move is allowed. In this new move, one pebble each is removed at vertices $v$ and…

Combinatorics · Mathematics 2017-08-29 Gyula Y. Katona , László F. Papp

This paper investigates some properties of the number of subtrees of a tree with given degree sequence. These results are used to characterize trees with the given degree sequence that have the largest number of subtrees, which generalizes…

Combinatorics · Mathematics 2012-09-04 Xiu-Mei Zhang , Xiao-Dong Zhang , Daniel Gray , Hua Wang

We study pattern densities in binary sequences, finding optimal limit sequences with fixed pattern densities.

Combinatorics · Mathematics 2026-01-08 Richard Kenyon

Tanglegrams are a special class of graphs appearing in applications concerning cospeciation and coevolution in biology and computer science. They are formed by identifying the leaves of two rooted binary trees. We give an explicit formula…

Combinatorics · Mathematics 2015-07-20 Sara Billey , Matjaž Konvalinka , Frederick A Matsen

Inspired by [4] we present a new algorithm for uniformly random generation of ordered trees in which all occuring outdegrees can be specified by a given sequence of numbers. The method can be used for random generation of binary or n-ary…

Discrete Mathematics · Computer Science 2021-12-30 Aleksander Kiryk

This paper describes a class of sequences that are in many ways similar to Fibonacci sequences: given n, sum the previous two terms and divide them by the largest possible power of n. The behavior of such sequences depends on n. We analyze…

Number Theory · Mathematics 2014-03-20 Brandon Avila , Tanya Khovanova

The distribution of a given sequence in the set of all sequences with n ones and m = M - n zeros are found by relating the problem to the partitions of a natural number in m natural summands, taking into account the order. The formulas…

Combinatorics · Mathematics 2016-08-16 J. Tharrats

In recent years there has been much interest in the Monte Carlo tree search algorithm, a new, adaptive, randomized optimization algorithm. In fields as diverse as Artificial Intelligence, Operations Research, and High Energy Physics,…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-05-17 S. Ali Mirsoleimani , Aske Plaat , Jaap van den Herik , Jos Vermaseren

Tree convex sets refer to a collection of sets such that each set in the collection is a subtree of a tree whose nodes are the elements of these sets. They extend the concept of row convex sets each of which is an interval over a total…

Data Structures and Algorithms · Computer Science 2009-06-03 Yuanlin Zhang , Forrest Sheng Bao

Decision trees are one of the most useful and popular methods in the machine learning toolbox. In this paper, we consider the problem of learning optimal decision trees, a combinatorial optimization problem that is challenging to solve at…

Machine Learning · Computer Science 2022-07-01 Rahul Mazumder , Xiang Meng , Haoyue Wang

Supertree methods are tree reconstruction techniques that combine several smaller gene trees (possibly on different sets of species) to build a larger species tree. The question of interest is whether the reconstructed supertree converges…

Populations and Evolution · Quantitative Biology 2021-05-06 Lam Si Tung Ho , Vu Dinh

The following magic trick is at the center of this paper. While the audience writes the first ten terms of a Fibonacci-like sequence (the sequence following the same recursion as the Fibonacci sequence), the magician calculates the sum of…

We speculate on the distribution of primes in exponentially growing, linear recurrence sequences $(u_n)_{n\geq 0}$ in the integers. By tweaking a heuristic which is successfully used to predict the number of prime values of polynomials, we…

Number Theory · Mathematics 2024-09-10 Jon Grantham , Andrew Granville

We study restricted computation models related to the Tree Evaluation Problem}. The TEP was introduced in earlier work as a simple candidate for the (*very*) long term goal of separating L and LogDCFL. The input to the problem is a rooted,…

Computational Complexity · Computer Science 2010-02-26 Dustin Wehr

We present a construction of 1-perfect binary codes, which gives a new lower bound on the number of such codes. We conjecture that this lower bound is asymptotically tight.

Combinatorics · Mathematics 2009-09-25 Denis Krotov , Sergey Avgustinovich

In this paper, we give a new representation of the Fibonacci numbers. This is achieved using Fibonacci trees. With the help of this representation, the nth Fibonacci number can be calculated without having any knowledge about the previous…

Combinatorics · Mathematics 2013-02-28 Indhumathi Raman

We consider sequences of finite weighted random graphs that converge locally to unimodular i.i.d. weighted random trees. When the weights are atomless, we prove that the matchings of maximal weight converge locally to a matching on the…

Probability · Mathematics 2025-03-31 Nathanaël Enriquez , Mike Liu , Laurent Ménard , Vianney Perchet
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