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Functional Magnetic Resonance Imaging~(fMRI) is widely used to study activation in the human brain. In most cases, data are commonly used to construct activation maps corresponding to a given paradigm. Results can be very variable, hence…

Applications · Statistics 2022-05-04 Ranjan Maitra

Functional data analysis is proved to be useful in many scientific applications. The physical process is observed as curves and often there are several curves observed due to multiple subjects, providing the replicates in statistical sense.…

Methodology · Statistics 2018-01-30 Tapabrata Maiti , Abolfazl Safikhani , Ping-Shou Zhong

Fuzzy Cognitive Maps (FCMs) are considered a soft computing technique combining elements of fuzzy logic and recurrent neural networks. They found multiple application in such domains as modeling of system behavior, prediction of time…

Machine Learning · Computer Science 2021-03-16 Piotr Szwed

An unprecedented amount of existing functional Magnetic Resonance Imaging (fMRI) data provides a new opportunity to understand the relationship between functional fluctuation and human cognition/behavior using a data-driven approach. To…

Machine Learning · Computer Science 2024-09-18 Jiaqi Ding , Tingting Dan , Ziquan Wei , Hyuna Cho , Paul J. Laurienti , Won Hwa Kim , Guorong Wu

Population imaging markedly increased the size of functional-imaging datasets, shedding new light on the neural basis of inter-individual differences. Analyzing these large data entails new scalability challenges, computational and…

Scientific workflows facilitate the automation of data analysis, and are used to process increasing amounts of data. Therefore, they tend to be resource-intensive and long-running, leading to significant energy consumption and carbon…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-08-07 Kathleen West , Magnus Reid , Yehia Elkhatib , Lauritz Thamsen

Software is increasingly produced in the form of ecosystems, collections of interdependent components maintained by a distributed community. These ecosystems act as network organizations, not markets, and thus often lack actionable…

Software Engineering · Computer Science 2020-12-14 Christopher Bogart , James Howison , James Herbsleb

Microbiome research is now moving beyond the compositional analysis of microbial taxa in a sample. Increasing evidence from large human microbiome studies suggests that functional consequences of changes in the intestinal microbiome may…

Applications · Statistics 2023-08-03 Chen Yang , Jiahao Mai , Xuan Cao , Aaron Burberry , Fabio Cominelli , Liangliang Zhang

This study introduces an efficient workflow for functional data analysis in classification problems, utilizing advanced orthogonal spline bases. The methodology is based on the flexible Splinets package, featuring a novel spline…

Methodology · Statistics 2023-11-30 Rani Basna , Hiba Nassar , Krzysztof Podgórski

It has been well established that Functional Connectomes (FCs), as estimated from functional MRI (fMRI) data, have an individual fingerprint that can be used to identify an individual from a population (subject-identification). Although…

We introduce FDApy, an open-source Python package for the analysis of functional data. The package provides tools for the representation of (multivariate) functional data defined on different dimensional domains and for functional data that…

Mathematical Software · Computer Science 2025-03-10 Steven Golovkine

Brain regions are often topographically connected: nearby locations within one brain area connect with nearby locations in another area. Mapping these connection topographies, or 'connectopies' in short, is crucial for understanding how…

Quantitative Methods · Quantitative Biology 2017-07-18 Koen V. Haak , Andre F. Marquand , Christian F. Beckmann

Electronic skin, a class of wearable electronic sensors that mimic the functionalities of human skin, has made remarkable success in applications including health monitoring, human-machine interaction and electronic-biological interfaces.…

In this work, based on the local phase information of images, an objective index, called the feature similarity index for tone-mapped images (FSITM), is proposed. To evaluate a tone mapping operator (TMO), the proposed index compares the…

Computer Vision and Pattern Recognition · Computer Science 2017-04-20 Hossein Ziaei Nafchi , Atena Shahkolaei , Reza Farrahi Moghaddam , Mohamed Cheriet

Dynamic functional connectivity analysis provides valuable information for understanding brain functional activity underlying different cognitive processes. Besides sliding window based approaches, a variety of methods have been developed…

Computer Vision and Pattern Recognition · Computer Science 2018-09-18 Hongming Li , Yong Fan

Reliable parameter extraction from experimental data is central to quantitative analysis in spectroscopy, diffraction, photoluminescence, chromatography, microscopy, and time-resolved measurements. We present FitED, a Python-based desktop…

Data Analysis, Statistics and Probability · Physics 2026-05-04 Mustafa Mahmoud Aboulsaad

Artificial intelligence (AI) reasoning and explainable AI (XAI) tasks have gained popularity recently, enabling users to explain the predictions or decision processes of AI models. This paper introduces Forest Monkey (FM), a toolkit…

Artificial Intelligence · Computer Science 2023-10-11 Jiajun Zhang , Georgina Cosma , Sarah Bugby , Jason Watkins

Linkography -- the analysis of links between the design moves that make up an episode of creative ideation or design -- can be used for both visual and quantitative assessment of creative activity traces. Traditional linkography, however,…

Human-Computer Interaction · Computer Science 2025-06-23 Amy Smith , Barrett R. Anderson , Jasmine Tan Otto , Isaac Karth , Yuqian Sun , John Joon Young Chung , Melissa Roemmele , Max Kreminski

In the recent years, scientific workflows gained more and more popularity. In scientific workflows, tasks are typically treated as black boxes. Dealing with their complex interrelations to identify optimization potentials and bottlenecks is…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-13 Ansgar Lößer , Joel Witzke , Florian Schintke , Björn Scheuermann

Resting-state functional MRI (rsfMRI) yields functional connectomes that can serve as cognitive fingerprints of individuals. Connectomic fingerprints have proven useful in many machine learning tasks, such as predicting subject-specific…

Machine Learning · Computer Science 2020-08-10 Gia H. Ngo , Meenakshi Khosla , Keith Jamison , Amy Kuceyeski , Mert R. Sabuncu