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Energy evaluation using fast Fourier transforms enables sampling billions of putative complex structures and hence revolutionized rigid protein-protein docking. However, in current methods efficient acceleration is achieved only in either…

Recently, a novel method based on coding partitions [1]-[4] has been used to derive power series expansions to previously intractable problems. In this method the coefficients at $k$ are determined by summing the contributions made by each…

Combinatorics · Mathematics 2012-03-23 Victor Kowalenko

We assume that particles are point-like objects even when not observed. We report on the consequences of our assumption within the realm of quantum theory. An important consequence is the necessity of vacuum fields to account for particle…

Quantum Physics · Physics 2010-10-27 Eduardo V. Flores

Zero-order ultrasensitivity (ZOU) is a long known and interesting phenomenon in enzyme networks. Here, a substrate is reversibly modified by two antagonistic enzymes (a "push-pull" system) and the fraction in modified state undergoes a…

Molecular Networks · Quantitative Biology 2013-11-27 P. K. Jithinraj , Ushasi Roy , Manoj Gopalakrishnan

We introduce a new method to reconstruct unknown quantum states out of incomplete and noisy information. The method is a linear convex optimization problem, therefore with a unique minimum, which can be efficiently solved with Semidefinite…

Quantum Physics · Physics 2011-12-01 Thiago O. Maciel , André T. Cesário , Reinaldo O. Vianna

The problem of estimating missing fragments of curves from a functional sample has been widely considered in the literature. However, a majority of the reconstruction methods rely on estimating the covariance matrix or the components of its…

Methodology · Statistics 2021-08-26 Antonio Elías , Raúl Jiménez , Hanlin Shang

A new method is proposed to numerically extract the diffusivity of a (typically nonlinear) diffusion equation from underlying stochastic particle systems. The proposed strategy requires the system to be in local equilibrium and have…

Statistical Mechanics · Physics 2018-05-09 Peter Embacher , Nicolas Dirr , Johannes Zimmer , Celia Reina

Rydberg atoms stand out as a highly promising platform for realizing quantum computation with significant advantages in constructing high-fidelity quantum gates. Floquet frequency modulation (FFM), in Rydberg-atom systems, provides a unique…

Quantum Physics · Physics 2025-02-27 Jun Wu , Jin-Lei Wu , Fu-Qiang Guo , Bing-Bing Liu , Shi-Lei Su , Xue-Ke Song , Liu Ye , Dong Wang

Detecting the zero-temperature thermal Order-by-Disorder transition in classical magnetic systems is notably difficult. We propose a method to probe this transition in an indirect way. The idea is to apply adequate magnetic fields to…

Statistical Mechanics · Physics 2020-07-28 Hugo Bacry , Leticia F. Cugliandolo , Marco Tarzia

Theorems on zeroes of the truncated generating function in the complex plane are reviewed. When examined in the framework of a statistical model of high energy collisions based on the negative binomial (Pascal) multiplicity distribution,…

High Energy Physics - Phenomenology · Physics 2009-11-11 M. Brambilla , A. Giovannini , R. Ugoccioni

The dominant theme of this thesis is that random matrix valued analytic functions, generalizing both random matrices and random analytic functions, for many purposes can (and perhaps should) be effectively studied in that level of…

Probability · Mathematics 2007-05-23 Manjunath Krishnapur

We show that the concept of bipartite fluctuations F provides a very efficient tool to detect quantum phase transitions in strongly correlated systems. Using state of the art numerical techniques complemented with analytical arguments, we…

Strongly Correlated Electrons · Physics 2012-03-13 Stephan Rachel , Nicolas Laflorencie , H. Francis Song , Karyn Le Hur

In this paper, we propose a general way of computing expectation values in the zero-range process, using an exact form of the partition function. As an example, we provide the fundamental diagram (the flux-density plot) of the asymmetric…

Statistical Mechanics · Physics 2009-02-16 Masahiro Kanai

We present quantum algorithms for the simulation of quantum systems in one spatial dimension, which result in quantum speedups that range from superpolynomial to polynomial. We first describe a method to simulate the evolution of the…

Quantum Physics · Physics 2016-08-09 Rolando D. Somma

We elaborate and validate a generalization of the renowned transition-path-sampling algorithm for a paradigmatic model of active particles, namely the Run-and-Tumble particles. Notwithstanding the non-equilibrium character of these…

Soft Condensed Matter · Physics 2024-11-20 Thomas Kiechl , Thomas Franosch , Michele Caraglio

By setting the inverse temperature $\beta$ loose to occupy the complex plane, Fisher showed that the zeros of the complex partition function $Z$, if approaching the real $\beta$ axis, reveal a thermodynamic phase transition. More recently,…

Strongly Correlated Electrons · Physics 2025-01-17 Yang Liu , Songtai Lv , Yuchen Meng , Zefan Tan , Erhai Zhao , Haiyuan Zou

We present a novel approach for the integration of scattering cross sections and the generation of partonic event samples in high-energy physics. We propose an importance sampling technique capable of overcoming typical deficiencies of…

High Energy Physics - Phenomenology · Physics 2020-04-29 Enrico Bothmann , Timo Janßen , Max Knobbe , Tobias Schmale , Steffen Schumann

Zeroth-order optimization methods are developed to overcome the practical hurdle of having knowledge of explicit derivatives. Instead, these schemes work with merely access to noisy functions evaluations. One of the predominant approaches…

Optimization and Control · Mathematics 2022-08-22 Wouter Jongeneel

In the future, ab initio quantum simulations of heavy ion collisions may become possible with large-scale fault-tolerant quantum computers. We propose a quantum algorithm for studying these collisions by looking at a class of observables…

High Energy Physics - Lattice · Physics 2021-12-08 Thomas D. Cohen , Henry Lamm , Scott Lawrence , Yukari Yamauchi

Fisher zeros play a central role in the theoretical understanding of phase transitions. However, their computation requires knowledge of the density of states, which limits their practical applicability. Alternative approaches based on the…

Computational Physics · Physics 2026-05-22 R. G. M. Rodrigues
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