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Motion-related artifacts are inevitable in Magnetic Resonance Imaging (MRI) and can bias automated neuroanatomical metrics such as cortical thickness. These biases can interfere with statistical analysis which is a major concern as motion…

Image and Video Processing · Electrical Eng. & Systems 2025-06-11 Charles Bricout , Samira Ebrahimi Kahou , Sylvain Bouix

Machine Learning with Deep Neural Networks (DNNs) has become a successful tool in solving tasks across various fields of application. However, the complexity of DNNs makes it difficult to understand how they solve their learned task. To…

Machine Learning · Computer Science 2023-06-16 Valerie Krug , Raihan Kabir Ratul , Christopher Olson , Sebastian Stober

The mouse is one of the most studied animal models in the field of systems neuroscience. Understanding the generalized patterns and decoding the neural representations that are evoked by the diverse range of natural scene stimuli in the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-13 Ahmed Qazi , Hamd Jalil , Asim Iqbal

A central goal in understanding human vision is to uncover the visual features that drive neuronal activity. A growing body of work has used artificial neural networks as encoding models to predict cortical responses to natural images,…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Idan Daniel Grosbard , Mor Geva , Galit Yovel

Brain imaging of mental health, neurodevelopmental and learning disorders has coupled with machine learning to identify patients based only on their brain activation, and ultimately identify features that generalize from smaller samples of…

Image and Video Processing · Electrical Eng. & Systems 2020-07-21 Laura Tomaz Da Silva , Nathalia Bianchini Esper , Duncan D. Ruiz , Felipe Meneguzzi , Augusto Buchweitz

The widespread use of deep neural networks has achieved substantial success in many tasks. However, there still exists a huge gap between the operating mechanism of deep learning models and human-understandable decision making, so that…

Artificial Intelligence · Computer Science 2021-03-08 Xiaowei Zhou , Jie Yin , Ivor Tsang , Chen Wang

Schizophrenia is a chronic neuropsychiatric disorder that causes distinct structural alterations within the brain. We hypothesize that deep learning applied to a structural neuroimaging dataset could detect disease-related alteration and…

Image and Video Processing · Electrical Eng. & Systems 2022-07-08 Junhao Zhang , Vishwanatha M. Rao , Ye Tian , Yanting Yang , Nicolas Acosta , Zihan Wan , Pin-Yu Lee , Chloe Zhang , Lawrence S. Kegeles , Scott A. Small , Jia Guo

One of the essential tasks in connectomics is the morphology analysis of neurons and organelles like mitochondria to shed light on their biological properties. However, these biological objects often have tangled parts or complex branching…

Computer Vision and Pattern Recognition · Computer Science 2020-04-22 Abhimanyu Talwar , Zudi Lin , Donglai Wei , Yuesong Wu , Bowen Zheng , Jinglin Zhao , Won-Dong Jang , Xueying Wang , Jeff W. Lichtman , Hanspeter Pfister

Artificial intelligence research to a great degree focuses on the brain and behaviors that the brain generates. But the brain, an extremely complex structure resulting from millions of years of evolution, can be viewed as a solution to…

Neurons and Cognition · Quantitative Biology 2017-03-07 Thomas E. Portegys

Hemispheric strokes impair motor control in contralateral body parts, necessitating effective rehabilitation strategies. Motor Imagery-based Brain-Computer Interfaces (MI-BCIs) promote neuroplasticity, aiding the recovery of motor…

Signal Processing · Electrical Eng. & Systems 2025-01-06 Praveen K. Parashiva , Sagila Gangadaran , A. P. Vinod

We present InvVis, a new approach for invertible visualization, which is reconstructing or further modifying a visualization from an image. InvVis allows the embedding of a significant amount of data, such as chart data, chart information,…

Computer Vision and Pattern Recognition · Computer Science 2023-09-06 Huayuan Ye , Chenhui Li , Yang Li , Changbo Wang

In modern medical diagnostics, magnetic resonance imaging (MRI) is an important technique that provides detailed insights into anatomical structures. In this paper, we present a comprehensive methodology focusing on streamlining the…

Image and Video Processing · Electrical Eng. & Systems 2024-04-25 Siddharth Jha , Zichen Gui , Benjamin Delbos , Richard Moreau , Arnaud Leleve , Irene Cheng

Conventionally, image denoising and high-level vision tasks are handled separately in computer vision. In this paper, we cope with the two jointly and explore the mutual influence between them. First we propose a convolutional neural…

Computer Vision and Pattern Recognition · Computer Science 2018-04-18 Ding Liu , Bihan Wen , Xianming Liu , Zhangyang Wang , Thomas S. Huang

Deep learning methods, in particular convolutional neural networks, have emerged as a powerful tool in medical image computing tasks. While these complex models provide excellent performance, their black-box nature may hinder real-world…

Image and Video Processing · Electrical Eng. & Systems 2022-10-18 Yuzhe Lu , Adam Perer

We demonstrate that a deep neural network can significantly improve optical microscopy, enhancing its spatial resolution over a large field-of-view and depth-of-field. After its training, the only input to this network is an image acquired…

Machine Learning · Computer Science 2017-11-21 Yair Rivenson , Zoltan Gorocs , Harun Gunaydin , Yibo Zhang , Hongda Wang , Aydogan Ozcan

Data profiling plays a critical role in understanding the structure of complex datasets and supporting numerous downstream tasks, such as social media analytics and financial fraud detection. While existing research predominantly focuses on…

Human-Computer Interaction · Computer Science 2025-03-11 Yanwei Huang , Yan Miao , Di Weng , Adam Perer , Yingcai Wu

Segmentation has been a major task in neuroimaging. A large number of automated methods have been developed for segmenting healthy and diseased brain tissues. In recent years, deep learning techniques have attracted a lot of attention as a…

Image and Video Processing · Electrical Eng. & Systems 2019-07-05 Jimit Doshi , Guray Erus , Mohamad Habes , Christos Davatzikos

The success of deep learning solving previously-thought hard problems has inspired many non-experts to learn and understand this exciting technology. However, it is often challenging for learners to take the first steps due to the…

Human-Computer Interaction · Computer Science 2020-02-28 Zijie J. Wang , Robert Turko , Omar Shaikh , Haekyu Park , Nilaksh Das , Fred Hohman , Minsuk Kahng , Duen Horng Chau

High-level visual brain regions contain subareas in which neurons appear to respond more strongly to examples of a particular semantic category, like faces or bodies, rather than objects. However, recent work has shown that while this…

Computer Vision and Pattern Recognition · Computer Science 2024-10-29 Alexander Lappe , Anna Bognár , Ghazaleh Ghamkhari Nejad , Albert Mukovskiy , Lucas Martini , Martin A. Giese , Rufin Vogels

Labeling vertebral discs from MRI scans is important for the proper diagnosis of spinal related diseases, including multiple sclerosis, amyotrophic lateral sclerosis, degenerative cervical myelopathy and cancer. Automatic labeling of the…

Image and Video Processing · Electrical Eng. & Systems 2021-08-29 Reza Azad , Lucas Rouhier , Julien Cohen-Adad