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This report explores the application of machine learning techniques on short timeseries gene expression data. Although standard machine learning algorithms work well on longer time-series', they often fail to find meaningful insights from…

Genomics · Quantitative Biology 2021-11-17 Akankshita Dash

Rapid growth of genetic databases means huge savings from improvements in their data compression, what requires better inexpensive statistical models. This article proposes automatized optimizations e.g. of Markov-like models, especially…

Information Theory · Computer Science 2022-05-04 Jarek Duda

Training of a Machine Learning model requires sufficient data. The sufficiency of the data is not always about the quantity, but about the relevancy and reduced redundancy. Data-generating processes create massive amounts of data. When used…

Machine Learning · Computer Science 2023-01-02 Rahman Salim Zengin , Volkan Sezer

Symbolic regression is the process of identifying mathematical expressions that fit observed output from a black-box process. It is a discrete optimization problem generally believed to be NP-hard. Prior approaches to solving the problem…

Neural and Evolutionary Computing · Computer Science 2021-11-19 T. Nathan Mundhenk , Mikel Landajuela , Ruben Glatt , Claudio P. Santiago , Daniel M. Faissol , Brenden K. Petersen

We study the data selection problem, whose aim is to select a small representative subset of data that can be used to efficiently train a machine learning model. We present a new data selection approach based on $k$-means clustering and…

Rapid advancements in genome sequencing have led to the collection of vast amounts of genomics data. Researchers may be interested in using machine learning models on such data to predict the pathogenicity or clinical significance of a…

Quantitative Methods · Quantitative Biology 2024-08-15 Arshmeet Kaur , Morteza Sarmadi

Compact symbolic expressions have been shown to be more efficient than neural network models in terms of resource consumption and inference speed when implemented on custom hardware such as FPGAs, while maintaining comparable…

Machine Learning · Computer Science 2025-02-11 Ho Fung Tsoi , Vladimir Loncar , Sridhara Dasu , Philip Harris

We analyse the search behaviour of genetic programming for symbolic regression in practically relevant but limited settings, allowing exhaustive enumeration of all solutions. This enables us to quantify the success probability of finding…

Neural and Evolutionary Computing · Computer Science 2026-03-30 Gabriel Kronberger , Fabricio Olivetti de Franca , Harry Desmond , Deaglan J. Bartlett , Lukas Kammerer

Nowadays, the major challenge in machine learning is the Big Data challenge. The big data problems due to large number of data points or large number of features in each data point, or both, the training of models have become very slow. The…

Machine Learning · Computer Science 2018-07-26 Vinod Kumar Chauhan , Anuj Sharma , Kalpana Dahiya

Recent work targeting large language models (LLMs) for code generation demonstrated that increasing the amount of training data through synthetic code generation often leads to exceptional performance. In this paper we explore data pruning…

Software Engineering · Computer Science 2024-07-09 Yun-Da Tsai , Mingjie Liu , Haoxing Ren

Data mining focuses on discovering interesting, non-trivial and meaningful information from large datasets. Data clustering is one of the unsupervised and descriptive data mining task which group data based on similarity features and…

Neural and Evolutionary Computing · Computer Science 2023-05-09 Pitawelayalage Dasun Dileepa Pitawela , Gamage Upeksha Ganegoda

Wind power forecasting (WPF) is significant to guide the dispatching of grid and the production planning of wind farm effectively. The intermittency and volatility of wind leading to the diversity of the training samples have a major impact…

Computational Engineering, Finance, and Science · Computer Science 2017-09-18 Wenbin Wu , Mugen Peng

Data pruning is the problem of identifying a core subset that is most beneficial to training and discarding the remainder. While pruning strategies are well studied for discriminative models like those used in classification, little…

Machine Learning · Computer Science 2025-03-17 Rania Briq , Jiangtao Wang , Stefan Kesselheim

Coresets are compact representations of data sets such that models trained on a coreset are provably competitive with models trained on the full data set. As such, they have been successfully used to scale up clustering models to massive…

Machine Learning · Statistics 2018-06-08 Olivier Bachem , Mario Lucic , Andreas Krause

Distributed dataflow systems like Apache Flink and Apache Spark simplify processing large amounts of data on clusters in a data-parallel manner. However, choosing suitable cluster resources for distributed dataflow jobs in both type and…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-14 Jonathan Will , Onur Arslan , Jonathan Bader , Dominik Scheinert , Lauritz Thamsen

We propose an adaptive graph coarsening method to jointly learn graph neural network (GNN) parameters and merge nodes via K-means clustering during training. As real-world graphs grow larger, processing them directly becomes increasingly…

Machine Learning · Computer Science 2025-10-01 Rostyslav Olshevskyi , Madeline Navarro , Santiago Segarra

Among ensemble clustering methods, Evidence Accumulation Clustering is one of the simplest technics. In this approach, a co-association (CA) matrix representing the co-clustering frequency is built and then clustered to extract consensus…

Machine Learning · Computer Science 2023-11-17 Gaëlle Candel

We consider a network of binary-valued sensors with a fusion center. The fusion center has to perform K-means clustering on the binary data transmitted by the sensors. In order to reduce the amount of data transmitted within the network,…

Information Theory · Computer Science 2018-01-18 Elsa Dupraz

In the era of large-scale model training, the extensive use of available datasets has resulted in significant computational inefficiencies. To tackle this issue, we explore methods for identifying informative subsets of training data that…

Machine Learning · Computer Science 2025-04-21 Jinghan Yang , Anupam Pani , Yunchao Zhang

Neural networks are susceptible to adversarial examples-small input perturbations that cause models to fail. Adversarial training is one of the solutions that stops adversarial examples; models are exposed to attacks during training and…

Machine Learning · Computer Science 2022-07-05 Maximilian Kaufmann , Yiren Zhao , Ilia Shumailov , Robert Mullins , Nicolas Papernot
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