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Btrim is a fast and lightweight software to trim adapters and low quality regions in reads from ultra high-throughput next-generation sequencing machines. It also can reliably identify barcodes and assign the reads to the original samples.…

Genomics · Quantitative Biology 2024-05-28 Yong Kong

With the emergence of onboard vision processing for areas such as the internet of things (IoT), edge computing and autonomous robots, there is increasing demand for computationally efficient convolutional neural network (CNN) models to…

Computer Vision and Pattern Recognition · Computer Science 2019-10-09 Daniel Barry , Munir Shah , Merel Keijsers , Humayun Khan , Banon Hopman

We propose a high-precision, fast, robust and cost-effective muon detector concept for an FCC-ee experiment. This design combines precision drift tubes with fast plastic scintillator strips to enable both spatial and timing measurements.…

Motherboard defect detection is critical for ensuring reliability in high-volume electronics manufacturing. While prior research in PCB inspection has largely targeted bare-board or trace-level defects, assembly-level inspection of full…

Computer Vision and Pattern Recognition · Computer Science 2025-10-17 Brandon Hill , Kma Solaiman

This paper focuses on YOLO-LITE, a real-time object detection model developed to run on portable devices such as a laptop or cellphone lacking a Graphics Processing Unit (GPU). The model was first trained on the PASCAL VOC dataset then on…

Computer Vision and Pattern Recognition · Computer Science 2018-11-15 Jonathan Pedoeem , Rachel Huang

With the rapid advancements of deep learning in recent years, hardware accelerators are continuously deployed in more and more safety-critical applications such as autonomous driving and robotics. While the accelerators are usually…

Hardware Architecture · Computer Science 2023-08-31 Zuodong Zhang , Renjie Wei , Meng Li , Yibo Lin , Runsheng Wang , Ru Huang

We present a superconducting device that realizes the sequential measurement of a transmon qubit. The device disables common limitations of dispersive readout such as Purcell effect or transients in the cavity mode by turning on and off the…

Quantum Physics · Physics 2020-05-08 Théau Peronnin , Danijela Marković , Quentin Ficheux , Benjamin Huard

We present mycelium-index, a streaming approximate nearest neighbor (ANN) index for high-dimensional vector spaces, inspired by the adaptive growth patterns of biological mycelium. The system continuously adapts its topology through myelial…

Machine Learning · Computer Science 2026-04-14 Anton Pakhunov

The detection of biomolecules at the single molecular level have important applications in the fields of biosensing and biomedical diagnosis. Solid state nanopore (SS-nanopore) is an effective tool to perform the single molecular detection,…

Biological Physics · Physics 2022-10-14 Jing Yang , Juan Wang , Ranfeng Wu , Yiming Chen , Cheng Zhang

Mobile genetic elements (MGEs) are as ubiquitous in nature as they are varied in type, ranging from viral insertions to transposons to incorporated plasmids. Horizontal transfer of MGEs across bacterial species may also pose a significant…

Genomics · Quantitative Biology 2024-06-19 Xiaolei Brian Zhang , Grace Oualline , Jim Shaw , Yun William Yu

On-device learning at the edge enables low-latency, private personalization with improved long-term robustness and reduced maintenance costs. Yet, achieving scalable, low-power end-to-end on-chip learning, especially from real-world…

Hardware Architecture · Computer Science 2026-03-31 Douwe den Blanken , Charlotte Frenkel

The Geant4 toolkit is the leading software for the simulation of particle transport through matter, widely used in nuclear physics, high-energy physics, and medical physics. However, the initial learning curve for new developers can be…

High Energy Physics - Experiment · Physics 2026-01-14 Jing Liu

Superparamagnetic iron oxide nanoparticles (SPIONs) have recently been introduced as information carriers in a testbed for molecular communication (MC) in duct flow. Here, a new receiver for this testbed is presented, based on the concept…

This paper presents a novel end-to-end system for pedestrian detection using Dynamic Vision Sensors (DVSs). We target applications where multiple sensors transmit data to a local processing unit, which executes a detection algorithm. Our…

Computer Vision and Pattern Recognition · Computer Science 2020-04-06 Anthony Bisulco , Fernando Cladera Ojeda , Volkan Isler , Daniel D. Lee

Two detection systems based on optical readout were developed: a. Integrative optical detector A 2nd generation of Time-Resolved Integrative Optical Neutron (TRION) detector was developed. It is based on an integrative optical technique,…

Instrumentation and Detectors · Physics 2017-05-01 Ilan Mor

Motivation: High throughput DNA sequencing (HTS) technologies generate an excessive number of small DNA segments -- called short reads -- that cause significant computational burden. To analyze the entire genome, each of the billions of…

Genomics · Quantitative Biology 2020-09-29 Mohammed Alser , Hasan Hassan , Hongyi Xin , Oğuz Ergin , Onur Mutlu , Can Alkan

We propose a low-cost and movable setup to probe minicharged particles (or milli-charged particles) using high-intensity proton fixed-target facilities. This proposal, FerMINI, consists of a milliQan-type detector, requiring…

High Energy Physics - Phenomenology · Physics 2019-08-07 Kevin J. Kelly , Yu-Dai Tsai

The perceptive models of autonomous driving require fast inference within a low latency for safety. While existing works ignore the inevitable environmental changes after processing, streaming perception jointly evaluates the latency and…

Computer Vision and Pattern Recognition · Computer Science 2022-07-22 Jinrong Yang , Songtao Liu , Zeming Li , Xiaoping Li , Jian Sun

Over the past few years, diffusion models have emerged as novel AI solutions, generating diverse multi-modal outputs from text prompts. Despite their capabilities, they face challenges in computing, such as excessive latency and energy…

Hardware Architecture · Computer Science 2025-01-13 Jaehoon Heo , Adiwena Putra , Jieon Yoon , Sungwoong Yune , Hangyeol Lee , Ji-Hoon Kim , Joo-Young Kim

The ever-growing diversity of pre-training text corpora has equipped language models with generalization capabilities across various downstream tasks. However, such diverse datasets are often too large for academic budgets; hence, most…

Computation and Language · Computer Science 2023-04-18 Jean Kaddour