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Nerve impulses, the currency of information flow in the brain, are generated by an instability of the neuronal membrane potential dynamics. Neuronal circuits exhibit collective chaos that appears essential for learning, memory, sensory…

Neurons and Cognition · Quantitative Biology 2024-12-31 Rainer Engelken , Michael Monteforte , Fred Wolf

This study explores the emergence of counter-inferential behavior in natural and artificial cognitive systems, that is, patterns in which agents misattribute empirical success or suppress adaptation, leading to epistemic rigidity or…

Artificial Intelligence · Computer Science 2025-06-10 Serge Dolgikh

Large sparse circuits of spiking neurons exhibit a balanced state of highly irregular activity under a wide range of conditions. It occurs likewise in sparsely connected random networks that receive excitatory external inputs and recurrent…

Neurons and Cognition · Quantitative Biology 2013-08-16 Sven Jahnke , Raoul-Martin Memmesheimer , Marc Timme

Causal structure learning is a key problem in many domains. Causal structures can be learnt by performing experiments on the system of interest. We address the largely unexplored problem of designing a batch of experiments that each…

Machine Learning · Computer Science 2021-11-25 Scott Sussex , Andreas Krause , Caroline Uhler

Sparse coding algorithms are about finding a linear basis in which signals can be represented by a small number of active (non-zero) coefficients. Such coding has many applications in science and engineering and is believed to play an…

Neural and Evolutionary Computing · Computer Science 2016-08-14 András Lőrincz , Zsolt Palotai , Gábor Szirtes

The response of complex networks to perturbations is of utmost importance in areas as diverse as ecosystem management, emergency response, and cell reprogramming. A fundamental property of networks is that the perturbation of one node can…

Molecular Networks · Quantitative Biology 2011-05-20 Sean P. Cornelius , William L. Kath , Adilson E. Motter

Brains learn to represent information from a large set of stimuli, typically by weak supervision. Unsupervised learning is therefore a natural approach for exploring the design of biological neural networks and their computations.…

Neurons and Cognition · Quantitative Biology 2025-10-17 Roy Urbach , Elad Schneidman

Large-scale neuroscience is generating rich datasets across animals, brain areas and behavioral contexts, yet our modeling efforts remains fragmented across isolated experiments. We argue that understanding behavior requires integrative…

We investigate sparse representations for control in reinforcement learning. While these representations are widely used in computer vision, their prevalence in reinforcement learning is limited to sparse coding where extracting…

Machine Learning · Computer Science 2018-11-19 Vincent Liu , Raksha Kumaraswamy , Lei Le , Martha White

Collective behavior plays a key role in the function of a wide range of physical, biological, and neurological systems where empirical evidence has recently uncovered the prevalence of higher-order interactions, i.e., structures that…

Adaptation and Self-Organizing Systems · Physics 2022-06-14 Per Sebastian Skardal , Lluís Arola-Fernández , Dane Taylor , Alex Arenas

There exist very few ways to isolate cognitive processes, historically defined via highly controlled laboratory studies, in more ecologically valid contexts. Specifically, it remains unclear as to what extent patterns of neural activity…

Neurons and Cognition · Quantitative Biology 2023-10-13 Stephen M. Gordon , Jonathan R. McDaniel , Kevin W. King , Vernon J. Lawhern , Jonathan Touryan

How do we capture the breadth of behavior in animal movement, from rapid body twitches to aging? Using high-resolution videos of the nematode worm $C. elegans$, we show that a single dynamics connects posture-scale fluctuations with…

Biological Physics · Physics 2024-09-02 Antonio C. Costa , Tosif Ahamed , David Jordan , Greg J. Stephens

Gene regulatory networks typically have low in-degrees, whereby any given gene is regulated by few of the genes in the network. What mechanisms might be responsible for these low in-degrees? Starting with an accepted framework of the…

Molecular Networks · Quantitative Biology 2009-10-22 Z. Burda , A. Krzywicki , O. C. Martin , M. Zagorski

We develop an artificial neural circuit for contour tracking and navigation inspired by the chemotaxis of the nematode Caenorhabditis elegans. In order to harness the computational advantages spiking neural networks promise over their…

Neural and Evolutionary Computing · Computer Science 2014-10-30 Shibani Santurkar , Bipin Rajendran

Over the past decade, the celebrated sparse representation model has achieved impressive results in various signal and image processing tasks. A convolutional version of this model, termed convolutional sparse coding (CSC), has been…

Signal Processing · Electrical Eng. & Systems 2018-10-03 Ives Rey-Otero , Jeremias Sulam , Michael Elad

A reflection of our ultimate understanding of a complex system is our ability to control its behavior. Typically, control has multiple prerequisites: It requires an accurate map of the network that governs the interactions between the…

Systems and Control · Computer Science 2016-09-21 Yang-Yu Liu , Albert-Laszló Barabási

Many observables of brain dynamics appear to be optimized for computation. Which connectivity structures underlie this fine-tuning? We propose that many of these structures are naturally encoded in the space that more directly relates to…

Disordered Systems and Neural Networks · Physics 2023-09-18 Lorenzo Tiberi , David Dahmen , Moritz Helias

A good understanding of how neurons use electrical pulses (i.e, spikes) to encode the signal information remains elusive. Analyzing spike sequences generated by individual neurons and by two coupled neurons (using the stochastic…

Neurons and Cognition · Quantitative Biology 2019-10-23 Maria Masoliver , Cristina Masoller

An essential step toward understanding neural circuits is linking their structure and their dynamics. In general, this relationship can be almost arbitrarily complex. Recent theoretical work has, however, begun to identify some broad…

Neurons and Cognition · Quantitative Biology 2017-03-10 Gabriel Koch Ocker , Yu Hu , Michael A. Buice , Brent Doiron , Krešimir Josić , Robert Rosenbaum , Eric Shea-Brown

Describing the collective activity of neural populations is a daunting task: the number of possible patterns grows exponentially with the number of cells, resulting in practically unlimited complexity. Recent empirical studies, however,…

Neurons and Cognition · Quantitative Biology 2012-02-02 Andrea K. Barreiro , Julijana Gjorgjieva , Fred Rieke , Eric Shea-Brown