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RNA is a fundamental class of biomolecules that mediate a large variety of molecular processes within the cell. Computational algorithms can be of great help in the understanding of RNA structure-function relationship. One of the main…

Biomolecules · Quantitative Biology 2015-02-20 Sandro Bottaro , Francesco Di Palma , Giovanni Bussi

In recent years, Deep Neural Networks (DNN) based methods have achieved remarkable performance in a wide range of tasks and have been among the most powerful and widely used techniques in computer vision. However, DNN-based methods are both…

Computer Vision and Pattern Recognition · Computer Science 2017-08-30 Peisong Wang , Jian Cheng

Fixed-point optimization of deep neural networks plays an important role in hardware based design and low-power implementations. Many deep neural networks show fairly good performance even with 2- or 3-bit precision when quantized weights…

Machine Learning · Computer Science 2017-02-28 Sungho Shin , Yoonho Boo , Wonyong Sung

According to the `ceRNA hypothesis', microRNAs (miRNAs) may act as mediators of an effective positive interaction between long coding or non-coding RNA molecules, carrying significant potential implications for a variety of biological…

Molecular Networks · Quantitative Biology 2016-01-28 Araks Martirosyan , Matteo Figliuzzi , Enzo Marinari , Andrea De Martino

Deep learning uses neural networks which are parameterised by their weights. The neural networks are usually trained by tuning the weights to directly minimise a given loss function. In this paper we propose to re-parameterise the weights…

Neural and Evolutionary Computing · Computer Science 2022-03-14 Michael Fairbank , Spyridon Samothrakis , Luca Citi

Learning sophisticated feature interactions behind user behaviors is critical in maximizing CTR for recommender systems. Despite great progress, existing methods seem to have a strong bias towards low- or high-order interactions, or require…

Information Retrieval · Computer Science 2017-03-14 Huifeng Guo , Ruiming Tang , Yunming Ye , Zhenguo Li , Xiuqiang He

We present a novel approach to modelling and learning vector fields from physical systems using neural networks that explicitly satisfy known linear operator constraints. To achieve this, the target function is modelled as a linear…

Machine Learning · Statistics 2021-04-29 Johannes Hendriks , Carl Jidling , Adrian Wills , Thomas Schön

With the emergence of large-scale pre-trained neural networks, methods to adapt such "foundation" models to data-limited downstream tasks have become a necessity. Fine-tuning, preference optimization, and transfer learning have all been…

Machine Learning · Statistics 2025-07-09 Javan Tahir , Surya Ganguli , Grant M. Rotskoff

Deep neural networks (DNNs) have achieved state-of-the-art results on time series classification (TSC) tasks. In this work, we focus on leveraging DNNs in the often-encountered practical scenario where access to labeled training data is…

Machine Learning · Computer Science 2021-03-05 Jyoti Narwariya , Pankaj Malhotra , Lovekesh Vig , Gautam Shroff , Vishnu Tv

This work considers a new task in geometric deep learning: generating a triangulation among a set of points in 3D space. We present PointTriNet, a differentiable and scalable approach enabling point set triangulation as a layer in 3D…

Computer Vision and Pattern Recognition · Computer Science 2020-07-24 Nicholas Sharp , Maks Ovsjanikov

Parameter fine tuning is a transfer learning approach whereby learned parameters from pre-trained source network are transferred to the target network followed by fine-tuning. Prior research has shown that this approach is capable of…

Computer Vision and Pattern Recognition · Computer Science 2019-09-20 Tasfia Shermin , Shyh Wei Teng , Manzur Murshed , Guojun Lu , Ferdous Sohel , Manoranjan Paul

Click-through rate (CTR) prediction is a crucial task in online display advertising. The embedding-based neural networks have been proposed to learn both explicit feature interactions through a shallow component and deep feature…

Machine Learning · Computer Science 2021-01-08 Wei Deng , Junwei Pan , Tian Zhou , Deguang Kong , Aaron Flores , Guang Lin

In recent years, machine learning has been proposed as a promising strategy to build accurate scoring functions for computational docking finalized to numerically empowered drug discovery. However, the latest studies have suggested that…

Quantitative Methods · Quantitative Biology 2023-02-17 F. Pellicani , D. Dal Ben , A. Perali , S. Pilati

Since the advent of CRISPR-Cas9, a groundbreaking gene-editing technology that enables precise genomic modifications via a short RNA guide sequence, there has been a marked increase in the accessibility and application of this technology…

Quantitative Methods · Quantitative Biology 2024-09-11 Condy Bao , Fuxiao Liu

Cross-domain recommendation (CDR) plays a critical role in alleviating the sparsity and cold-start problem and substantially boosting the performance of recommender systems. Existing CDR methods prefer to either learn a common preference…

Information Retrieval · Computer Science 2024-08-02 Xiaofei Zhu , Yabo Yin , Li Wang

Convolutional neural networks (CNNs) are deep learning frameworks which are well-known for their notable performance in classification tasks. Hence, many skeleton-based action recognition and segmentation (SBARS) algorithms benefit from…

Machine Learning · Computer Science 2019-11-13 Babak Hosseini , Romain Montagne , Barbara Hammer

We propose an efficient transfer learning method for adapting ImageNet pre-trained Convolutional Neural Network (CNN) to fine-grained image classification task. Conventional transfer learning methods typically face the trade-off between…

Computer Vision and Pattern Recognition · Computer Science 2019-06-13 Xiangxi Mo , Ruizhe Cheng , Tianyi Fang

In this work, we propose new objective functions to train deep neural network based density ratio estimators and apply it to a change point detection problem. Existing methods use linear combinations of kernels to approximate the density…

Machine Learning · Computer Science 2019-05-27 Haidar Khan , Lara Marcuse , Bülent Yener

In recent years, deep neural networks have achieved great success in the field of computer vision. However, it is still a big challenge to deploy these deep models on resource-constrained embedded devices such as mobile robots, smart phones…

Computer Vision and Pattern Recognition · Computer Science 2018-05-30 Yiming Hu , Siyang Sun , Jianquan Li , Xingang Wang , Qingyi Gu

Representation learning from 3D point clouds is challenging due to their inherent nature of permutation invariance and irregular distribution in space. Existing deep learning methods follow a hierarchical feature extraction paradigm in…

Computer Vision and Pattern Recognition · Computer Science 2020-11-03 Rahul Chakwate , Arulkumar Subramaniam , Anurag Mittal
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