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A trend in high performance computers that is becoming increasingly popular is the use of symmetric multiprocessing (SMP) rather than the older paradigm of MPP. MPI codes that ran and scaled well on MPP machines can often be run on an SMP…

High Energy Physics - Lattice · Physics 2009-10-31 Steven Gottlieb , Sonali Tamhankar

The tremendous advance in computer technology in the past decade has made it possible to achieve the performance of a supercomputer on a very small budget. We have built a multi-CPU cluster of Pentium PC capable of parallel computations…

Distributed, Parallel, and Cluster Computing · Computer Science 2009-11-07 X. Q. Luo , E. B. Gregory , J. C. Yang , Y. L. Wang , D. Chang , Y. Lin

High Performance Computing (HPC) platforms allow scientists to model computationally intensive algorithms. HPC clusters increasingly use General-Purpose Graphics Processing Units (GPGPUs) as accelerators; FPGAs provide an attractive…

Hardware Architecture · Computer Science 2015-04-20 Syed Waqar Nabi , Saji N. Hameed , Wim Vanderbauwhede

Computing on graphics processors is maybe one of the most important developments in computational science to happen in decades. Not since the arrival of the Beowulf cluster, which combined open source software with commodity hardware to…

Mathematical Software · Computer Science 2011-09-21 Felipe A. Cruz , Simon K. Layton , Lorena A. Barba

As exascale systems reach unprecedented concurrency, traditional performance analysis tools struggle with the overhead of massive-scale telemetry. We present an accelerated infrastructure for the hpcanalysis framework that leverages a…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-12 Dragana Grbic

MPI+X has been the de facto standard for distributed memory parallel programming. It is widely used primarily as an explicit two-sided communication model, which often leads to complex and error-prone code. Alternatively, PGAS model…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-09-05 Baodi Shan , Mauricio Araya-Polo , Barbara Chapman

We detail the performance optimizations made in rocHPL, AMD's open-source implementation of the High-Performance Linpack (HPL) benchmark targeting accelerated node architectures designed for exascale systems such as the Frontier…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-04-21 Noel Chalmers , Jakub Kurzak , Damon McDougall , Paul T. Bauman

High-performance computing, together with a neural network model trained from data generated with first-principles methods, has greatly boosted applications of \textit{ab initio} molecular dynamics in terms of spatial and temporal scales on…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-01-06 Zhuoqiang Guo , Denghui Lu , Yujin Yan , Siyu Hu , Rongrong Liu , Guangming Tan , Ninghui Sun , Wanrun Jiang , Lijun Liu , Yixiao Chen , Linfeng Zhang , Mohan Chen , Han Wang , Weile Jia

Accurate performance prediction is essential for optimizing scientific applications on modern high-performance computing (HPC) architectures. Widely used performance models primarily focus on cache and memory bandwidth, which is suitable…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-24 Xuanzhengbo Ren , Yuta Kawai , Tetsuya Hoshino , Hirofumi Tomita , Takahiro Katagiri , Daichi Mukunoki , Seiya Nishizawa

Efficiently solving large-scale linear systems is a critical challenge in electromagnetic simulations, particularly when using the Crank-Nicolson Finite-Difference Time-Domain (CN-FDTD) method. Existing iterative solvers are commonly…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-24 Haoyuan Zhang , Yaqian Gao , Xinxin Zhang , Jialin Li , Runfeng Jin , Yidong Chen , Feng Zhang , Wu Yuan , Wenpeng Ma , Shan Liang , Jian Zhang , Zhonghua Lu

Neural networks have become indispensable for a wide range of applications, but they suffer from high computational- and memory-requirements, requiring optimizations from the algorithmic description of the network to the hardware…

Signal Processing · Electrical Eng. & Systems 2020-05-05 Andreas Toftegaard Kristensen , Robert Giterman , Alexios Balatsoukas-Stimming , Andreas Burg

Tensor processing units (TPUs) are one of the most well-known machine learning (ML) accelerators utilized at large scale in data centers as well as in tiny ML applications. TPUs offer several improvements and advantages over conventional ML…

Hardware Architecture · Computer Science 2024-07-12 Mohammed Elbtity , Peyton Chandarana , Ramtin Zand

We present a new code for astrophysical magneto-hydrodynamics specifically designed and optimized for high performance and scaling on modern and future supercomputers. We describe a novel hybrid OpenMP/MPI programming model that emerged…

Instrumentation and Methods for Astrophysics · Physics 2017-03-08 Peter Mendygral , Nick Radcliffe , Krishna Kandalla , David Porter , Brian J. O'Neill , Chris Nolting , Paul Edmon , Julius M. F. Donnert , Thomas W. Jones

This study presents scaling results and a performance analysis across different supercomputers and compilers for the Met Office weather and climate model, LFRic. The model is shown to scale to large numbers of nodes which meets the design…

With multi-core processors a ubiquitous building block of modern supercomputers, it is now past time to enable applications to embrace these developments in processor design. To achieve exascale performance, applications will need ways of…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-08-13 Michele Weiland , Lawrence Mitchell , Gerard Gorman , Stephan Kramer , Mark Parsons , James Southern

We introduce a high-performance virtual machine (VM) written in a numerically fast language like Fortran or C to evaluate very large expressions. We discuss the general concept of how to perform computations in terms of a VM and present…

Computational Physics · Physics 2015-09-22 Bijan Chokoufe Nejad , Thorsten Ohl , Jürgen Reuter

High-performance computing are based more and more in heterogeneous architectures and GPGPUs have become one of the main integrated blocks in these, as the recently emerged Mali GPU in embedded systems or the NVIDIA GPUs in HPC servers. In…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-07-28 Albert Saà-Garriga , David Castells-Rufas , Jordi Carrabina

Heterogeneous systems are becoming increasingly prevalent. In order to exploit the rich compute resources of such systems, robust programming models are needed for application developers to seamlessly migrate legacy code from today's…

In drug discovery, molecular docking is the task in charge of estimating the position of a molecule when interacting with the docking site. This task is usually used to perform screening of a large library of molecules, in the early phase…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-01-21 Emanuele Vitali , Davide Gadioli , Gianluca Palermo , Andrea Beccari , Carlo Cavazzoni , Cristina Silvano

This paper presents an in-depth analysis of timing closure challenges and constraints in Field Programmable Gate Arrays (FPGAs) and Application Specific Integrated Circuits (ASICs). We examine core timing principles, architectural…

Hardware Architecture · Computer Science 2025-11-03 Mostafa Darvishi