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Related papers: Evolutionary Innovation Viewed as Novel Physical P…

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Understanding how genotypes map onto phenotypes, fitness, and eventually organisms is arguably the next major missing piece in a fully predictive theory of evolution. We refer to this generally as the problem of the genotype-phenotype map.…

Developmental trajectories are known to be canalized, or robust to both environmental and genetic perturbations. However, even when these trajectories are decanalized by an environmental perturbation outside of the range of conditions to…

Biological Physics · Physics 2025-09-25 Yuuki Matsushita , Archishman Raju

We introduce a complex systems perspective on innovation in networks in which innovation is conceptualized as a form of creative act associated with the dynamics and evolution of business network. We show how innovation is a form of…

Adaptation and Self-Organizing Systems · Physics 2012-03-08 Ian Wilkinson , Louise Young

One of the most intriguing questions in evolution is how organisms exhibit suitable phenotypic variation to rapidly adapt in novel selective environments which is crucial for evolvability. Recent work showed that when selective environments…

Populations and Evolution · Quantitative Biology 2015-08-28 Kostas Kouvaris , Jeff Clune , Louis Kounios , Markus Brede , Richard A. Watson

The possibility of complicated dynamic behaviour driven by non-linear feedbacks in dynamical systems has revolutionized science in the latter part of the last century. Yet despite examples of complicated frequency dynamics, the possibility…

Populations and Evolution · Quantitative Biology 2017-02-07 Iaroslav Ispolatov , Michael Doebeli

The idea that there are any large-scale trends in the evolution of biological organisms is highly controversial. It is commonly believed, for example, that there is a large-scale trend in evolution towards increasing complexity, but…

Neural and Evolutionary Computing · Computer Science 2021-06-08 Peter D. Turney

Since Newton, all classical and quantum physics depends upon the "Newtonian Paradigm". Here the relevant variables of the system are identified. The boundary conditions creating the phase space of all possible values of the variables are…

Physics and Society · Physics 2022-07-13 Stuart A. Kauffman , Andrea Roli

Innovation is to organizations what evolution is to organisms: it is how organisations adapt to changes in the environment and improve. Governments, institutions and firms that innovate are more likely to prosper and stand the test of time;…

Physics and Society · Physics 2018-02-07 T. M. A. Fink , M. Reeves , R. Palma , R. S. Farr

1. Theoretical models pertaining to feedbacks between ecological and evolutionary processes are prevalent in multiple biological fields. An integrative overview is currently lacking, due to little crosstalk between the fields and the use of…

Darwin's theory of evolution by natural selection does not predict long-term progress or advancement, nor does it provide a useful way to define or understand these concepts. Nevertheless, the history of life is marked by major trends that…

Populations and Evolution · Quantitative Biology 2019-03-25 Owen M. Gilbert

Evolution has fascinated quantitative and physical scientists for decades: how can the random process of mutation, recombination, and duplication of genetic information generate the diversity of life? What determines the rate of evolution?…

Populations and Evolution · Quantitative Biology 2018-04-23 Richard A. Neher , Aleksandra M. Walczak

Biological evolution is a complex blend of ever changing structural stability, variability and emergence of new phenotypes, niches, ecosystems. We wish to argue that the evolution of life marks the end of a physics world view of law…

Other Quantitative Biology · Quantitative Biology 2012-01-11 Giuseppe Longo , Maël Montévil , Stuart Kauffman

Evolutionary change over time in the context of data pipelines is certain, especially with regard to the structure and semantics of data as well as to the pipeline operators. Dealing with these changes, i.e. providing long-term maintenance,…

Databases · Computer Science 2025-07-29 Kevin M. Kramer

Evolutionary dynamics is often viewed as a subtle process of change accumulation that causes a divergence among organisms and their genomes. However, this interpretation is an inheritance of a gradualistic view that has been challenged at…

Populations and Evolution · Quantitative Biology 2018-07-27 Jacobo Aguirre , Pablo Catalán , José A. Cuesta , Susanna Manrubia

Models on innovation, for the most part, do not include a comprehensive and end-to-end view. Most innovation policy attention seems to be focused on the capacity to innovate and on input factors such as R&D investment, scientific…

General Economics · Economics 2021-06-30 Robert M Yawson

Discrete dynamical models underpin systems biology, but we still lack substrate-agnostic diagnostics for identifying finite-horizon dynamical signatures that may be relevant to open-ended evolution (OEE), such as the recurrent production of…

Populations and Evolution · Quantitative Biology 2026-05-27 Amahury J. López-Díaz , Pedro Juan Rivera Torres , Gerardo L. Febres , Carlos Gershenson

Our understanding of the evolutionary process has gone a long way since the publication, 150 years ago, of "On the origin of species" by Charles R. Darwin. The XXth Century witnessed great efforts to embrace replication, mutation, and…

Populations and Evolution · Quantitative Biology 2012-02-02 Susanna C. Manrubia , Jose A. Cuesta

It is increasingly evident that there is more to biological evolution than natural selection; moreover, the concept of evolution is not limited to biology. We propose an integrative framework for characterizing how entities evolve, in which…

Populations and Evolution · Quantitative Biology 2007-05-23 Liane Gabora , Diederik Aerts

This paper attempts to make feasible the evolutionary emergence of novelty in a supposedly deterministic world which behavior is associated with those of the mathematical dynamical systems. The work was motivated by the observation of…

Adaptation and Self-Organizing Systems · Physics 2024-06-26 R. Herrero , F. Pi , J. Rius , G. Orriols

We apply the theory of learning to physically renormalizable systems in an attempt to develop a theory of biological evolution, including the origin of life, as multilevel learning. We formulate seven fundamental principles of evolution…

Populations and Evolution · Quantitative Biology 2022-10-12 Vitaly Vanchurin , Yuri I. Wolf , Mikhail I. Katsnelson , Eugene V. Koonin