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The paper addresses the underlying source of two forms of induced anisotropy in granular materials: contact orientation anisotropy and contact force anisotropy. A rational, mathematical structure is reviewed for the manner in which fabric…

Soft Condensed Matter · Physics 2019-01-23 Matthew R. Kuhn

This paper deals with the analysis of the asymptotic limit toward the derivation of macroscopic equations for a class of equations modeling complex multicellular systems by methods of the kinetic theory. After having chosen an appropriate…

Analysis of PDEs · Mathematics 2016-10-12 Nisrine Outada , Nicolas Vauchelet , Thami Akrid , Mohamed Khaladi

Soft biological tissues exhibit a tendency to maintain a preferred state of tensile stress, known as tensional homeostasis, which is restored even after external mechanical stimuli. This macroscopic behavior can be described using the…

Machine Learning · Computer Science 2025-01-23 Hagen Holthusen , Tim Brepols , Kevin Linka , Ellen Kuhl

In this paper, we study the problem of shape-programming of incompressible hyperelastic shells through differential growth. The aim of the current work is to determine the growth tensor (or growth functions) that can produce the deformation…

Numerical Analysis · Mathematics 2022-10-13 Zhanfeng Li , Jiong Wang , Mokarram Hossain , Chennakesava Kadapa

We derive a course grained, continuum model of the 2D vertex model, applicable for different underlying geometries, and allowing for analytical analysis of an otherwise numerical model. Using a geometric approach and out--of--equilibrium…

Soft Condensed Matter · Physics 2022-08-31 Doron Grossman , Jean-Francois Joanny

We introduce models for viscoelastic materials, both solids and fluids, based on logarithmic stresses to capture the elastic contribution to the material response. The matrix logarithm allows to link the measures of strain, that naturally…

Analysis of PDEs · Mathematics 2024-10-10 Gennaro Ciampa , Giulio G. Giusteri , Alessio G. Soggiu

We study the dynamics of proliferating cell collectives whose microscopic constituents' growth is inhibited by macroscopic growth-induced stress. Discrete particle simulations of a growing collective show the emergence of concentric-ring…

Biological Physics · Physics 2024-05-17 Scott Weady , Bryce Palmer , Adam Lamson , Taeyoon Kim , Reza Farhadifar , Michael J. Shelley

A contemporary procedure to grow artificial tissue is to seed cells onto a porous biomaterial scaffold and culture it within a perfusion bioreactor to facilitate the transport of nutrients to growing cells. Typical models of cell growth for…

Tissues and Organs · Quantitative Biology 2018-05-01 Andrew L. Krause , Dmitry Beliaev , Robert A. Van Gorder , Sarah L. Waters

We develop a coarse-grained stochastic theory for axonal growth on micropatterned substrates using the Shannon--Jaynes maximum entropy principle. Starting from a Langevin description of growth cone motion, we infer the effective…

Biological Physics · Physics 2026-04-29 Julian Sutaria , Cristian Staii

Biological soft tissues exhibit substantial inter-subject variability, making the automation of constitutive material modeling essential for patient-specific analysis and design. Such materials are not only highly nonlinear but also display…

Computational Physics · Physics 2026-04-16 Bahador Bahmani

During growth, tissue expands and deforms. Given its elastic properties, stresses emerge in an expanding and deforming tissue. Cell rearrangements can dissipate these stresses and numerous experiments confirm the viscoelastic properties of…

Tissues and Organs · Quantitative Biology 2017-10-20 M. D. Peters , D. Iber

We introduce a spatially extended mathematical model for Duchenne muscular dystrophy based on a damage-driven paradigm, in which immune recruitment is triggered by tissue injury. The model is formulated as a reaction--diffusion--chemotaxis…

Mathematical Physics · Physics 2026-04-06 Gaetana Gambino , Francesco Gargano , Alessandra Rizzo , Vincenzo Sciacca

Optimal growth of structures governed by spatially stochastic dynamics arises in many scientific settings, for example in processes such as solution-based crystallization and the formation of microbial biofilms on patterned substrates or…

Optimization and Control · Mathematics 2025-12-16 Maike C. de Jongh , Cristian Spitoni , Emilio N. M. Cirillo

Using formal asymptotic methods we derive a free boundary problem representing one of the simplest mathematical descriptions of the growth and death of a tumour or other biological tissue. The mathematical model takes the form of a closed…

Tissues and Organs · Quantitative Biology 2019-07-16 Joe Eyles , John F. King , Vanessa Styles

Models of tissue growth are now well established, in particular in relation to their applications to cancer. They describe the dynamics of cells subject to motion resulting from a pressure gradient generated by the death and birth of cells,…

Analysis of PDEs · Mathematics 2018-09-07 Piotr Gwiazda , Benoît Perthame , Agnieszka Świerczewska-Gwiazda

Composite materials often exhibit mechanical anisotropy owing to the material properties or geometrical configurations of the microstructure. This makes their inverse design a two-fold problem. First, we must learn the type and orientation…

Computational Engineering, Finance, and Science · Computer Science 2024-12-19 Asghar A. Jadoon , Karl A. Kalina , Manuel K. Rausch , Reese Jones , Jan N. Fuhg

In this paper, we formulate a geometric theory of the mechanics of arterial growth. An artery is modeled as a finite-length thick shell that is made of an incompressible nonlinear anisotropic solid. An initial radially-symmetric…

Soft Condensed Matter · Physics 2025-11-18 Aditya Kumar , Arash Yavari

One of the essential questions in the area of granular matter is, how to obtain macroscopic tensorial quantities like stress and strain from ``microscopic'' quantities like the contact forces in a granular assembly. Different averaging…

Statistical Mechanics · Physics 2007-05-23 Marc Lätzel , Stefan Luding , Hans J. Herrmann

Growth (and resorption) of biological tissue is formulated in the continuum setting. The treatment is macroscopic, rather than cellular or sub-cellular. Certain assumptions that are central to classical continuum mechanics are revisited,…

Quantitative Methods · Quantitative Biology 2015-06-26 K. Garikipati , E. M. Arruda , K. Grosh , H. Narayanan , S. Calve

We introduce a new phase field model for tumour growth where viscoelastic effects are taken into account. The model is derived from basic thermodynamical principles and consists of a convected Cahn--Hilliard equation with source terms for…

Numerical Analysis · Mathematics 2024-06-21 Harald Garcke , Balázs Kovács , Dennis Trautwein