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We investigate the power of graph isomorphism algorithms based on algebraic reasoning techniques like Gr\"obner basis computation. The idea of these algorithms is to encode two graphs into a system of equations that are satisfiable if and…

Computational Complexity · Computer Science 2015-02-23 Christoph Berkholz , Martin Grohe

In this paper, we show that the constant-dimensional Weisfeiler-Leman algorithm for groups (Brachter & Schweitzer, LICS 2020) can be fruitfully used to improve parallel complexity upper bounds on isomorphism testing for several families of…

Data Structures and Algorithms · Computer Science 2025-09-09 Joshua A. Grochow , Michael Levet

We present the first parallel fixed-parameter algorithm for subgraph isomorphism in planar graphs, bounded-genus graphs, and, more generally, all minor-closed graphs of locally bounded treewidth. Our randomized low depth algorithm has a…

Data Structures and Algorithms · Computer Science 2020-07-03 Lukas Gianinazzi , Torsten Hoefler

Stars' chemical signatures provide invaluable insights into stellar cluster formation. This study utilized the Weisfeiler-Lehman (WL) Graph Kernel to examine a 15-dimensional elemental abundance space. Through simulating chemical…

Astrophysics of Galaxies · Physics 2023-06-27 Yuan-Sen Ting , Bhavesh Sharma

We introduce $r$-loopy Weisfeiler-Leman ($r$-$\ell{}$WL), a novel hierarchy of graph isomorphism tests and a corresponding GNN framework, $r$-$\ell{}$MPNN, that can count cycles up to length $r + 2$. Most notably, we show that…

Machine Learning · Computer Science 2024-11-08 Raffaele Paolino , Sohir Maskey , Pascal Welke , Gitta Kutyniok

The individualization-refinement paradigm provides a strong toolbox for testing isomorphism of two graphs and indeed, the currently fastest implementations of isomorphism solvers all follow this approach. While these solvers are fast in…

Computational Complexity · Computer Science 2017-05-10 Daniel Neuen , Pascal Schweitzer

Graph neural network architectures aligned with the $k$-dimensional Weisfeiler--Leman ($k$-WL) hierarchy offer theoretically well-understood expressive power. However, these architectures often fail to deliver state-of-the-art predictive…

Machine Learning · Computer Science 2024-06-06 Luis Müller , Christopher Morris

A graph is said to be circular-arc if the vertices can be associated with arcs of a circle so that two vertices are adjacent if and only if the corresponding arcs overlap. It is proved that the isomorphism of circular-arc graphs can be…

Data Structures and Algorithms · Computer Science 2019-07-15 Roman Nedela , Ilia Ponomarenko , Peter Zeman

The k-th power of a n-vertex graph X is the iterated cartesian product of X with itself. The k-th symmetric power of X is the quotient graph of certain subgraph of its k-th power by the natural action of the symmetric group. It is natural…

Spectral Theory · Mathematics 2008-01-16 Alfredo Alzaga , Rodrigo Iglesias , Ricardo Pignol

Most state-of-the-art graph kernels only take local graph properties into account, i.e., the kernel is computed with regard to properties of the neighborhood of vertices or other small substructures. On the other hand, kernels that do take…

Machine Learning · Computer Science 2017-09-25 Christopher Morris , Kristian Kersting , Petra Mutzel

We discuss the definability of finite graphs in first-order logic with two relation symbols for adjacency and equality of vertices. The logical depth $D(G)$ of a graph $G$ is equal to the minimum quantifier depth of a sentence defining $G$…

Combinatorics · Mathematics 2013-04-30 Oleg Pikhurko , Oleg Verbitsky

Graph is an usual representation of relational data, which are ubiquitous in manydomains such as molecules, biological and social networks. A popular approach to learningwith graph structured data is to make use of graph kernels, which…

Machine Learning · Computer Science 2022-08-02 Dai Hai Nguyen , Canh Hao Nguyen , Hiroshi Mamitsuka

The Weisfeiler-Lehman (WL) test is a widely used algorithm in graph machine learning, including graph kernels, graph metrics, and graph neural networks. However, it focuses only on the consistency of the graph, which means that it is unable…

Machine Learning · Computer Science 2023-05-02 Zhongxi Fang , Jianming Huang , Xun Su , Hiroyuki Kasai

The isomorphism problem is a fundamental problem in network analysis, which involves capturing both low-order and high-order structural information. In terms of extracting low-order structural information, graph isomorphism algorithms…

Data Structures and Algorithms · Computer Science 2023-07-28 Yifan Feng , Jiashu Han , Shihui Ying , Yue Gao

In recent years, graph neural networks (GNNs) have emerged as a powerful neural architecture to learn vector representations of nodes and graphs in a supervised, end-to-end fashion. Up to now, GNNs have only been evaluated empirically --…

Recent work shows that the expressive power of Graph Neural Networks (GNNs) in distinguishing non-isomorphic graphs is exactly the same as that of the Weisfeiler-Lehman (WL) graph test. In particular, they show that the WL test can be…

Given a pair of graphs $\textbf{A}$ and $\textbf{B}$, the problems of deciding whether there exists either a homomorphism or an isomorphism from $\textbf{A}$ to $\textbf{B}$ have received a lot of attention. While graph homomorphism is…

Data Structures and Algorithms · Computer Science 2021-07-08 Silvia Butti , Victor Dalmau

Graph isomorphism testing is usually approached via the comparison of graph invariants. Two popular alternatives that offer a good trade-off between expressive power and computational efficiency are combinatorial (i.e., obtained via the…

Machine Learning · Computer Science 2022-03-03 Or Feldman , Amit Boyarski , Shai Feldman , Dani Kogan , Avi Mendelson , Chaim Baskin

Current GNN architectures use a vertex neighborhood aggregation scheme, which limits their discriminative power to that of the 1-dimensional Weisfeiler-Lehman (WL) graph isomorphism test. Here, we propose a novel graph convolution operator…

Machine Learning · Computer Science 2020-09-22 Clemens Damke , Vitalik Melnikov , Eyke Hüllermeier

The expressive power of graph neural network formalisms is commonly measured by their ability to distinguish graphs. For many formalisms, the k-dimensional Weisfeiler-Leman (k-WL) graph isomorphism test is used as a yardstick. In this paper…

Machine Learning · Computer Science 2020-07-24 Floris Geerts