Related papers: Combinatorial generation via permutation languages…
A Gray code for a combinatorial class is a method for listing the objects in the class so that successive objects differ in some prespecified, small way, typically expressed as a bounded Hamming distance. In a previous work, the authors of…
Certain families of combinatorial objects admit recursive descriptions in terms of generating trees: each node of the tree corresponds to an object, and the branch leading to the node encodes the choices made in the construction of the…
We introduce the concept of Most, and Least, Compact Spanning Trees - denoted respectively by $T^*(G)$ and $T^\#(G)$ - of a simple, connected, undirected and unweighted graph $G(V, E, W)$. For a spanning tree $T(G) \in \mathcal{T}(G)$ to be…
A classical problem in Distance Geometry, with multiple practical applications (in molecular structure determination, sensor network localization etc.) is to find the possible placements of the vertices of a graph with given edge lengths.…
The local tree-width of a graph G=(V,E) is the function ltw^G: N -> N that associates with every natural number r the maximal tree-width of an r-neighborhood in G. Our main graph theoretic result is a decomposition theorem for graphs with…
We define an algorithm k which takes a connected graph G on a totally ordered vertex set and returns an increasing tree R (which is not necessarily a subtree of G). We characterize the set of graphs G such that k(G)=R. Because this set has…
The Neighbor-Joining algorithm is a popular distance-based phylogenetic method that computes a tree metric from a dissimilarity map arising from biological data. Realizing dissimilarity maps as points in Euclidean space, the algorithm…
Combinatorial optimization problems are pervasive across science and industry. Modern deep learning tools are poised to solve these problems at unprecedented scales, but a unifying framework that incorporates insights from statistical…
We study the problem of distance-preserving graph compression for weighted paths and trees. The problem entails a weighted graph $G = (V, E)$ with non-negative weights, and a subset of edges $E^{\prime} \subset E$ which needs to be removed…
Working with generating functions, the combinatorics of a recurrence relation can be expressed in a way that allows for more efficient calculation of the quantity. This is true of the Catalan numbers for an ordered binary tree…
We study aspects of the enumeration of permutation classes, sets of permutations closed downwards under the subpermutation order. First, we consider monotone grid classes of permutations. We present procedures for calculating the generating…
We present time-efficient distributed algorithms for decomposing graphs with large edge or vertex connectivity into multiple spanning or dominating trees, respectively. As their primary applications, these decompositions allow us to achieve…
The \emph{Steiner tree} problem is one of the fundamental and classical problems in combinatorial optimization. In this paper, we study this problem in the $\mathcal{CONGESTED}$ $\mathcal{CLIQUE}$ model of distributed computing and present…
For a connected graph, a vertex separator is a set of vertices whose removal creates at least two components. A vertex separator $S$ is minimal if it contains no other separator as a strict subset and a minimum vertex separator is a minimal…
Motivated by the study of matrix elimination orderings in combinatorial scientific computing, we utilize graph sketching and local sampling to give a data structure that provides access to approximate fill degrees of a matrix undergoing…
In this paper, we investigate the problem of generating the spanning trees of a graph $G$ up to the automorphisms or "symmetries" of $G$. After introducing and surveying this problem for general input graphs, we present algorithms that…
We provide a data structure for maintaining an embedding of a graph on a surface (represented combinatorially by a permutation of edges around each vertex) and computing generators of the fundamental group of the surface, in amortized time…
Combinatorial Hopf algebras of trees exemplify the connections between operads and bialgebras. Painted trees were introduced recently as examples of how graded Hopf operads can bequeath Hopf structures upon compositions of coalgebras. We…
Generating graphs from a target distribution is a significant challenge across many domains, including drug discovery and social network analysis. In this work, we introduce a novel graph generation method leveraging $K^2$-tree…
This paper introduces a new combinatorial framework for modeling the growth of binary trees through a discrete evolution process that incorporates a growing rule and an extinction rule. Building upon the theory of increasingly labeled…