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While Graph Neural Networks (GNNs) have achieved remarkable results in a variety of applications, recent studies exposed important shortcomings in their ability to capture the structure of the underlying graph. It has been shown that the…

Machine Learning · Computer Science 2023-09-26 Giorgos Bouritsas , Fabrizio Frasca , Stefanos Zafeiriou , Michael M. Bronstein

Two graphs are homomorphism indistinguishable over a graph class $\mathcal{F}$, denoted by $G \equiv_{\mathcal{F}} H$, if $\operatorname{hom}(F,G) = \operatorname{hom}(F,H)$ for all $F \in \mathcal{F}$ where $\operatorname{hom}(F,G)$…

Combinatorics · Mathematics 2023-07-11 Daniel Neuen

The problem of graph isomorphism is an important but challenging problem in the field of graph analysis, for example: analyzing the similarity of two chemical molecules, or studying the expressive ability of graph neural networks. WL test…

Other Computer Science · Computer Science 2024-02-14 Wanghan Xu

Very recently, Thomass\'e, Trotignon and Vuskovic [WG 2014] have given an FPT algorithm for Weighted Independent Set in bull-free graphs parameterized by the weight of the solution, running in time $2^{O(k^5)} \cdot n^9$. In this article we…

Data Structures and Algorithms · Computer Science 2014-07-08 Henri Perret du Cray , Ignasi Sau

Current GNN architectures use a vertex neighborhood aggregation scheme, which limits their discriminative power to that of the 1-dimensional Weisfeiler-Lehman (WL) graph isomorphism test. Here, we propose a novel graph convolution operator…

Machine Learning · Computer Science 2020-09-22 Clemens Damke , Vitalik Melnikov , Eyke Hüllermeier

Various recent proposals increase the distinguishing power of Graph Neural Networks GNNs by propagating features between $k$-tuples of vertices. The distinguishing power of these "higher-order'' GNNs is known to be bounded by the…

Machine Learning · Computer Science 2021-06-15 Pablo Barceló , Floris Geerts , Juan Reutter , Maksimilian Ryschkov

We prove that unless the Exponential Time Hypothesis (ETH) fails, deciding if there is a homomorphism from graph $G$ to graph $H$ cannot be done in time $|V(H)|^{o(|V(G)|)}$. We also show an exponential-time reduction from Graph…

Data Structures and Algorithms · Computer Science 2016-02-17 Marek Cygan , Fedor V. Fomin , Alexander Golovnev , Alexander S. Kulikov , Ivan Mihajlin , Jakub Pachocki , Arkadiusz Socała

Given a class of graphs $\mathcal{H}$, the problem $\oplus\mathsf{Sub}(\mathcal{H})$ is defined as follows. The input is a graph $H\in \mathcal{H}$ together with an arbitrary graph $G$. The problem is to compute, modulo $2$, the number of…

Computational Complexity · Computer Science 2023-10-12 Leslie Ann Goldberg , Marc Roth

We consider the group isomorphism problem: given two finite groups G and H specified by their multiplication tables, decide if G cong H. For several decades, the n^(log_p n + O(1)) generator-enumeration bound (where p is the smallest prime…

Data Structures and Algorithms · Computer Science 2013-12-09 David J. Rosenbaum , Fabian Wagner

The Weisfeiler-Leman (WL) dimension is an established measure for the inherent descriptive complexity of graphs and relational structures. It corresponds to the number of variables that are needed and sufficient to define the object of…

Discrete Mathematics · Computer Science 2024-02-06 Sandra Kiefer , Daniel Neuen

Random walk kernels have been introduced in seminal work on graph learning and were later largely superseded by kernels based on the Weisfeiler-Leman test for graph isomorphism. We give a unified view on both classes of graph kernels. We…

Machine Learning · Computer Science 2023-01-18 Nils M. Kriege

The graph isomorphism problem looks deceptively simple, but although polynomial-time algorithms exist for certain types of graphs such as planar graphs and graphs with bounded degree or eigenvalue multiplicity, its complexity class is still…

Discrete Mathematics · Computer Science 2025-07-11 Stefan Klus , Patrick Gelß

Color refinement is a classical technique used to show that two given graphs G and H are non-isomorphic; it is very efficient, although it does not succeed on all graphs. We call a graph G amenable to color refinement if it succeeds in…

Computational Complexity · Computer Science 2015-05-05 V. Arvind , Johannes Köbler , Gaurav Rattan , Oleg Verbitsky

In recent years, algorithms and neural architectures based on the Weisfeiler--Leman algorithm, a well-known heuristic for the graph isomorphism problem, have emerged as a powerful tool for machine learning with graphs and relational data.…

We develop the methodology of positioning graph vertices relative to each other to solve the problem of determining isomorphism of two undirected graphs. Based on the position of the vertex in one of the graphs, it is determined the…

Data Structures and Algorithms · Computer Science 2018-02-13 Anatoly D. Plotnikov

A graph $G$ covers a graph $H$ if there exists a locally bijective homomorphism from $G$ to $H$. We deal with regular covers where this homomorphism is prescribed by the action of a semiregular subgroup of $\textrm{Aut}(G)$. We study…

Discrete Mathematics · Computer Science 2017-01-31 Jiří Fiala , Pavel Klavík , Jan Kratochvíl , Roman Nedela

It's important to design polynomial time algorithms to test if two graphs are isomorphic at least for some special classes of graphs. An approach to this was presented by Eugene M. Luks(1981) in the work \textit{Isomorphism of Graphs of…

Discrete Mathematics · Computer Science 2012-09-06 Adria Alcala Mena

In this work we produce a framework for constructing universal function approximators on graph isomorphism classes. We prove how this framework comes with a collection of theoretically desirable properties and enables novel analysis. We…

Data Structures and Algorithms · Computer Science 2020-10-27 Rickard Brüel-Gabrielsson

Many complex questions in biology, physics, and mathematics can be mapped to the graph isomorphism problem and the closely related graph automorphism problem. In particular, these problems appear in the context of network visualization,…

Data Structures and Algorithms · Computer Science 2012-11-14 Charo I. Del Genio , Thilo Gross

In this paper, we relate a beautiful theory by Lov\'asz with a popular heuristic algorithm for the graph isomorphism problem, namely the color refinement algorithm and its k-dimensional generalization known as the Weisfeiler-Leman…

Data Structures and Algorithms · Computer Science 2018-05-23 Holger Dell , Martin Grohe , Gaurav Rattan
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