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TREC-COVID is a community evaluation designed to build a test collection that captures the information needs of biomedical researchers using the scientific literature during a pandemic. One of the key characteristics of pandemic search is…

Information Retrieval · Computer Science 2020-05-12 Ellen Voorhees , Tasmeer Alam , Steven Bedrick , Dina Demner-Fushman , William R Hersh , Kyle Lo , Kirk Roberts , Ian Soboroff , Lucy Lu Wang

Health literacy has emerged as a crucial factor in making appropriate health decisions and ensuring treatment outcomes. However, medical jargon and the complex structure of professional language in this domain make health information…

Computation and Language · Computer Science 2022-01-11 Yue Guo , Wei Qiu , Yizhong Wang , Trevor Cohen

The emergence of the novel COVID-19 pandemic has had a significant impact on global healthcare and the economy over the past few months. The virus's rapid widespread has led to a proliferation in biomedical research addressing the pandemic…

Artificial Intelligence · Computer Science 2020-07-21 Chongyan Chen , Islam Akef Ebeid , Yi Bu , Ying Ding

Literature search is critical for any scientific research. Different from Web or general domain search, a large portion of queries in scientific literature search are entity-set queries, that is, multiple entities of possibly different…

Information Retrieval · Computer Science 2018-05-01 Jiaming Shen , Jinfeng Xiao , Xinwei He , Jingbo Shang , Saurabh Sinha , Jiawei Han

Learning semantically meaningful representations from scientific documents can facilitate academic literature search and improve performance of recommendation systems. Pre-trained language models have been shown to learn rich textual…

Computation and Language · Computer Science 2023-05-09 Anastasia Razdaibiedina , Alexander Brechalov

Since the emergence of the worldwide pandemic of COVID-19, relevant research has been published at a dazzling pace, which yields an abundant amount of big data in biomedical literature. Due to the high volum of relevant literature, it is…

Information Retrieval · Computer Science 2022-12-09 Yeseul Jeon , Dongjun Chung , Jina Park , Ick Hoon Jin

The rapid expansion of research across machine learning, vision, and language has produced a volume of publications that is increasingly difficult to synthesize. Traditional bibliometric tools rely mainly on metadata and offer limited…

Computer Vision and Pattern Recognition · Computer Science 2026-04-16 Zhucun Xue , Jiangning Zhang , Juntao Jiang , Jinzhuo Liu , Haoyang He , Teng Hu , Xiaobin Hu , Yong Liu , Shuicheng Yan

Mental health disorders may cause severe consequences on all the countries' economies and health. For example, the impacts of the COVID-19 pandemic, such as isolation and travel ban, can make us feel depressed. Identifying early signs of…

Information Retrieval · Computer Science 2022-07-14 Maryam Shahabikargar

This study presents a comprehensive review of the potential of multimodal deep learning (DL) in medical diagnosis, using COVID-19 as a case example. Motivated by the success of artificial intelligence applications during the COVID-19…

Detailed mobile sensing data from phones, watches, and fitness trackers offer an unparalleled opportunity to quantify and act upon previously unmeasurable behavioral changes in order to improve individual health and accelerate responses to…

Machine Learning · Computer Science 2022-06-06 Mike A. Merrill , Tim Althoff

With the rapid evolution of social media, fake news has become a significant social problem, which cannot be addressed in a timely manner using manual investigation. This has motivated numerous studies on automating fake news detection.…

Computation and Language · Computer Science 2021-02-25 Amila Silva , Ling Luo , Shanika Karunasekera , Christopher Leckie

Medical text embedding models are foundational to a wide array of healthcare applications, ranging from clinical decision support and biomedical information retrieval to medical question answering, yet they remain hampered by two critical…

Computation and Language · Computer Science 2025-08-07 Mohammad Khodadad , Ali Shiraee Kasmaee , Mahdi Astaraki , Hamidreza Mahyar

Most existing large language models (LLMs) are expensive to adapt after deployment, especially when a task requires newly produced information or niche domain knowledge. Recent work has shown that, by manipulating and optimizing their…

Computation and Language · Computer Science 2026-05-15 Zeyu Huang , Adhiguna Kuncoro , Qixuan Feng , Jiajun Shen , Lucio Dery , Arthur Szlam , Marc'Aurelio Ranzato

The rapid expansion of biomedical publications creates challenges for organizing knowledge and detecting emerging trends, underscoring the need for scalable and interpretable methods. Common clustering and topic modeling approaches such as…

Machine Learning · Computer Science 2026-02-25 Lana E. Yeganova , Won G. Kim , Shubo Tian , Natalie Xie , Donald C. Comeau , W. John Wilbur , Zhiyong Lu

Pre-trained language models (PLMs) have been the de facto paradigm for most natural language processing (NLP) tasks. This also benefits biomedical domain: researchers from informatics, medicine, and computer science (CS) communities propose…

Computation and Language · Computer Science 2023-07-18 Benyou Wang , Qianqian Xie , Jiahuan Pei , Zhihong Chen , Prayag Tiwari , Zhao Li , Jie fu

Recent advances in the healthcare industry have led to an abundance of unstructured data, making it challenging to perform tasks such as efficient and accurate information retrieval at scale. Our work offers an all-in-one scalable solution…

Information Retrieval · Computer Science 2023-02-15 Shreya Saxena , Raj Sangani , Siva Prasad , Shubham Kumar , Mihir Athale , Rohan Awhad , Vishal Vaddina

Accurately linking news articles to scientific research works is a critical component in a number of applications, such as measuring the social impact of a research work and detecting inaccuracies or distortions in science news. Although…

Information Retrieval · Computer Science 2021-07-15 Jun Wang , Bei Yu

From more than half a century ago indexing scientific articles has been studied intensively to provide a more efficient data retrieval and to conserve researchers invaluable time. In the last two decades with the emergence of the World Wide…

Digital Libraries · Computer Science 2014-01-07 Azam Majooni , Mona Masood , Amir Akhavan

This paper describes the work of the Data Science for Digital Health (DS4DH) group at the TREC Health Misinformation Track 2021. The TREC Health Misinformation track focused on the development of retrieval methods that provide relevant,…

Information Retrieval · Computer Science 2022-02-15 Boya Zhang , Nona Naderi , Fernando Jaume-Santero , Douglas Teodoro

The practice of evidence-based medicine (EBM) urges medical practitioners to utilise the latest research evidence when making clinical decisions. Because of the massive and growing volume of published research on various medical topics,…

Computation and Language · Computer Science 2017-06-27 Abeed Sarker , Diego Molla , Cecile Paris