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Providing visual summaries of scientific publications can increase information access for readers and thereby help deal with the exponential growth in the number of scientific publications. Nonetheless, efforts in providing visual…
Neural rankers based on deep pretrained language models (LMs) have been shown to improve many information retrieval benchmarks. However, these methods are affected by their the correlation between pretraining domain and target domain and…
The COVID-19 pandemic has resulted in a tremendous need for access to the latest scientific information, primarily through the use of text mining and search tools. This has led to both corpora for biomedical articles related to COVID-19…
As scientists worldwide search for answers to the overwhelmingly unknown behind the deadly pandemic, the literature concerning COVID-19 has been growing exponentially. Keeping abreast of the body of literature at such a rapidly advancing…
Keeping track of scientific challenges, advances and emerging directions is a fundamental part of research. However, researchers face a flood of papers that hinders discovery of important knowledge. In biomedicine, this directly impacts…
Timely access to accurate scientific literature in the battle with the ongoing COVID-19 pandemic is critical. This unprecedented public health risk has motivated research towards understanding the disease in general, identifying drugs to…
Finding answers related to a pandemic of a novel disease raises new challenges for information seeking and retrieval, as the new information becomes available gradually. TREC COVID search track aims to assist in creating search tools to aid…
With worldwide concerns surrounding the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), there is a rapidly growing body of scientific literature on the virus. Clinicians, researchers, and policy-makers need to be able to…
The COVID-19 pandemic triggered a wave of novel scientific literature that is impossible to inspect and study in a reasonable time frame manually. Current machine learning methods offer to project such body of literature into the vector…
Keyword-based searches are today's standard in digital libraries. Yet, complex retrieval scenarios like in scientific knowledge bases, need more sophisticated access paths. Although each document somewhat contributes to a domain's body of…
Biomedical research yields a wealth of information, much of which is only accessible through the literature. Consequently, literature search is an essential tool for building on prior knowledge in clinical and biomedical research. Although…
Open-retrieval question answering systems are generally trained and tested on large datasets in well-established domains. However, low-resource settings such as new and emerging domains would especially benefit from reliable question…
With worldwide concerns surrounding the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), there is a rapidly growing body of literature on the virus. Clinicians, researchers, and policy-makers need a way to effectively search…
The pandemic has accelerated the pace at which COVID-19 scientific papers are published. In addition, the process of manually assigning semantic indexes to these papers by experts is even more time-consuming and overwhelming in the current…
Increasing number of COVID-19 research literatures cause new challenges in effective literature screening and COVID-19 domain knowledge aware Information Retrieval. To tackle the challenges, we demonstrate two tasks along withsolutions,…
The COVID-19 global pandemic has resulted in international efforts to understand, track, and mitigate the disease, yielding a significant corpus of COVID-19 and SARS-CoV-2-related publications across scientific disciplines. As of May 2020,…
Biomedical summarization requires large datasets to train for text generation. We show that while transfer learning offers a viable option for addressing this challenge, an in-domain pre-training does not always offer advantages in a BioASQ…
Citation recommendation systems for the scientific literature, to help authors find papers that should be cited, have the potential to speed up discoveries and uncover new routes for scientific exploration. We treat this task as a ranking…
Publications in the life sciences are characterized by a large technical vocabulary, with many lexical and semantic variations for expressing the same concept. Towards addressing the problem of relevance in biomedical literature search, we…
To address complex problems, scholars are increasingly faced with challenges of integrating diverse knowledge domains. We analyzed the evolution of this convergence paradigm in the broad ecosystem of brain science, which provides a…