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Pre-trained language models (PLMs) have proven to be effective for document re-ranking task. However, they lack the ability to fully interpret the semantics of biomedical and health-care queries and often rely on simplistic patterns for…

Computation and Language · Computer Science 2023-05-09 Deepak Gupta , Dina Demner-Fushman

In recent years, the introduction of knowledge graphs (KGs) has significantly advanced recommender systems by facilitating the discovery of potential associations between items. However, existing methods still face several limitations.…

Information Retrieval · Computer Science 2025-04-18 Ziqiang Cui , Yunpeng Weng , Xing Tang , Fuyuan Lyu , Dugang Liu , Xiuqiang He , Chen Ma

The rapid expansion of publicly-available medical data presents a challenge for clinicians and researchers alike, increasing the gap between the volume of scientific literature and its applications. The steady growth of studies and findings…

Artificial Intelligence · Computer Science 2025-08-06 Taine J. Elliott , Stephen P. Levitt , Ken Nixon , Martin Bekker

Much of biomedical and healthcare data is encoded in discrete, symbolic form such as text and medical codes. There is a wealth of expert-curated biomedical domain knowledge stored in knowledge bases and ontologies, but the lack of reliable…

Artificial Intelligence · Computer Science 2020-06-25 David Chang , Ivana Balazevic , Carl Allen , Daniel Chawla , Cynthia Brandt , Richard Andrew Taylor

Recently, ChatGPT, a representative large language model (LLM), has gained considerable attention due to its powerful emergent abilities. Some researchers suggest that LLMs could potentially replace structured knowledge bases like knowledge…

Computation and Language · Computer Science 2024-01-31 Linyao Yang , Hongyang Chen , Zhao Li , Xiao Ding , Xindong Wu

Traditional methods of linking large language models (LLMs) to knowledge bases via the semantic similarity search often fall short of capturing complex relational dynamics. To address these limitations, we introduce AutoKG, a lightweight…

Computation and Language · Computer Science 2023-11-28 Bohan Chen , Andrea L. Bertozzi

Knowledge Graphs (KGs) structure real-world entities and their relationships into triples, enhancing machine reasoning for various tasks. While domain-specific KGs offer substantial benefits, their manual construction is often inefficient…

Computation and Language · Computer Science 2025-06-02 Jiaqi Sun , Shiyou Qian , Zhangchi Han , Wei Li , Zelin Qian , Dingyu Yang , Jian Cao , Guangtao Xue

Knowledge graphs (KGs) are a powerful approach for integrating heterogeneous data and making inferences in biology and many other domains, but a coherent solution for constructing, exchanging, and facilitating the downstream use of…

In recent years, Natural Language Processing (NLP) has played a significant role in various Artificial Intelligence (AI) applications such as chatbots, text generation, and language translation. The emergence of large language models (LLMs)…

Computation and Language · Computer Science 2024-07-10 Amanda Kau , Xuzeng He , Aishwarya Nambissan , Aland Astudillo , Hui Yin , Amir Aryani

In the era of personalized education, the provision of comprehensible explanations for learning recommendations is of a great value to enhance the learner's understanding and engagement with the recommended learning content. Large language…

Artificial Intelligence · Computer Science 2025-01-23 Hasan Abu-Rasheed , Christian Weber , Madjid Fathi

To tackle the problem of domain-specific knowledge scarcity within large language models (LLMs), knowledge graph-retrievalaugmented method has been proven to be an effective and efficient technique for knowledge infusion. However, existing…

Computation and Language · Computer Science 2024-06-07 Zhouyu Jiang , Ling Zhong , Mengshu Sun , Jun Xu , Rui Sun , Hui Cai , Shuhan Luo , Zhiqiang Zhang

The recent proliferation of large language models (LLMs) holds the potential to revolutionize healthcare, with strong capabilities in diverse medical tasks. Yet, deploying LLMs in high-stakes healthcare settings requires rigorous…

Machine Learning · Computer Science 2025-12-22 Shasha Zhou , Mingyu Huang , Jack Cole , Charles Britton , Ming Yin , Jan Wolber , Ke Li

Efficiently finding doctors and locations is an important search problem for patients in the healthcare domain, for which traditional information retrieval methods tend not to work optimally. In the last ten years, knowledge graphs (KGs)…

Artificial Intelligence · Computer Science 2023-10-10 Mayank Kejriwal , Hamid Haidarian , Min-Hsueh Chiu , Andy Xiang , Deep Shrestha , Faizan Javed

Pre-trained language models (LMs) have become ubiquitous in solving various natural language processing (NLP) tasks. There has been increasing interest in what knowledge these LMs contain and how we can extract that knowledge, treating LMs…

Computation and Language · Computer Science 2021-09-16 Mujeen Sung , Jinhyuk Lee , Sean Yi , Minji Jeon , Sungdong Kim , Jaewoo Kang

Knowledge Graphs (KGs) store structured factual knowledge by linking entities through relationships, crucial for many applications. These applications depend on the KG's factual accuracy, so verifying facts is essential, yet challenging.…

Databases · Computer Science 2026-02-12 Farzad Shami , Stefano Marchesin , Gianmaria Silvello

Knowledge Graphs have been one of the fundamental methods for integrating heterogeneous data sources. Integrating heterogeneous data sources is crucial, especially in the biomedical domain, where central data-driven tasks such as drug…

Machine Learning · Computer Science 2020-12-22 Islam Akef Ebeid , Majdi Hassan , Tingyi Wanyan , Jack Roper , Abhik Seal , Ying Ding

Knowledge Graph Embedding (KGE) techniques are crucial in learning compact representations of entities and relations within a knowledge graph, facilitating efficient reasoning and knowledge discovery. While existing methods typically focus…

Computation and Language · Computer Science 2024-10-29 Pengcheng Jiang , Lang Cao , Cao Xiao , Parminder Bhatia , Jimeng Sun , Jiawei Han

Many mathematical models have been leveraged to design embeddings for representing Knowledge Graph (KG) entities and relations for link prediction and many downstream tasks. These mathematically-inspired models are not only highly scalable…

Artificial Intelligence · Computer Science 2023-09-25 Xiou Ge , Yun-Cheng Wang , Bin Wang , C. -C. Jay Kuo

Large Language Models (LLMs) excel at language understanding but remain limited in knowledge-intensive domains due to hallucinations, outdated information, and limited explainability. Text-based retrieval-augmented generation (RAG) helps…

Computation and Language · Computer Science 2026-02-09 Larissa Pusch , Alexandre Courtiol , Tim Conrad

Accurate interpretation of pediatric dental clinical records and safe antibiotic prescribing remain persistent challenges in dental informatics. Traditional rule-based clinical decision support systems struggle with unstructured dental…

Computation and Language · Computer Science 2025-12-11 Zihan Han , Junyan Ge , Caifeng Li
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