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Healthcare domain generates a lot of unstructured and semi-structured text. Natural Language processing (NLP) has been used extensively to process this data. Deep Learning based NLP especially Large Language Models (LLMs) such as BERT have…

Computation and Language · Computer Science 2023-01-11 Kunal Suri , Atul Singh , Prakhar Mishra , Swapna Sourav Rout , Rajesh Sabapathy

While recent research on natural language inference has considerably benefited from large annotated datasets, the amount of inference-related knowledge (including commonsense) provided in the annotated data is still rather limited. There…

Computation and Language · Computer Science 2021-09-10 Xiaoyu Yang , Xiaodan Zhu , Zhan Shi , Tianda Li

Despite the growing use of Electronic Health Records (EHR) for AI-assisted diagnosis prediction, most data-driven models struggle to incorporate clinically meaningful medical knowledge. They often rely on limited ontologies, lacking…

Machine Learning · Computer Science 2025-04-17 Pengfei Hu , Chang Lu , Fei Wang , Yue Ning

In recent years, pre-trained language models (PLMs) achieve the best performance on a wide range of natural language processing (NLP) tasks. While the first models were trained on general domain data, specialized ones have emerged to more…

Computation and Language · Computer Science 2023-05-08 Yanis Labrak , Adrien Bazoge , Richard Dufour , Mickael Rouvier , Emmanuel Morin , Béatrice Daille , Pierre-Antoine Gourraud

Knowledge of a disease includes information of various aspects of the disease, such as signs and symptoms, diagnosis and treatment. This disease knowledge is critical for many health-related and biomedical tasks, including consumer health…

Computation and Language · Computer Science 2020-10-09 Yun He , Ziwei Zhu , Yin Zhang , Qin Chen , James Caverlee

Recently, the pre-trained language model, BERT (and its robustly optimized version RoBERTa), has attracted a lot of attention in natural language understanding (NLU), and achieved state-of-the-art accuracy in various NLU tasks, such as…

Computation and Language · Computer Science 2019-09-30 Wei Wang , Bin Bi , Ming Yan , Chen Wu , Zuyi Bao , Jiangnan Xia , Liwei Peng , Luo Si

Online medical forums have become a predominant platform for answering health-related information needs of consumers. However, with a significant rise in the number of queries and the limited availability of experts, it is necessary to…

Unsupervised pretraining is an integral part of many natural language processing systems, and transfer learning with language models has achieved remarkable results in many downstream tasks. In the clinical application of medical code…

Computation and Language · Computer Science 2022-06-03 Shaoxiong Ji , Matti Hölttä , Pekka Marttinen

State of the art models using deep neural networks have become very good in learning an accurate mapping from inputs to outputs. However, they still lack generalization capabilities in conditions that differ from the ones encountered during…

Computation and Language · Computer Science 2018-08-28 Alexey Romanov , Chaitanya Shivade

The paper describes the open Russian medical language understanding benchmark covering several task types (classification, question answering, natural language inference, named entity recognition) on a number of novel text sets. Given the…

Computation and Language · Computer Science 2022-07-14 Pavel Blinov , Arina Reshetnikova , Aleksandr Nesterov , Galina Zubkova , Vladimir Kokh

The introduction of Large Language Models (LLMs), and the vast volume of publicly available medical data, amplified the application of NLP to the medical domain. However, LLMs are pretrained on data that are not explicitly relevant to the…

Computation and Language · Computer Science 2023-12-12 Chris Solomou

Pre-trained language models (PLMs) have been the de facto paradigm for most natural language processing (NLP) tasks. This also benefits biomedical domain: researchers from informatics, medicine, and computer science (CS) communities propose…

Computation and Language · Computer Science 2023-07-18 Benyou Wang , Qianqian Xie , Jiahuan Pei , Zhihong Chen , Prayag Tiwari , Zhao Li , Jie fu

Biomedical literature is a rapidly expanding field of science and technology. Classification of biomedical texts is an essential part of biomedicine research, especially in the field of biology. This work proposes the fine-tuned DistilBERT,…

Computation and Language · Computer Science 2024-04-23 Ziqing Guo

Identifying arguments is a necessary prerequisite for various tasks in automated discourse analysis, particularly within contexts such as political debates, online discussions, and scientific reasoning. In addition to theoretical advances…

Computation and Language · Computer Science 2025-05-29 Marc Feger , Katarina Boland , Stefan Dietze

This work presents biomedical and clinical language models for Spanish by experimenting with different pretraining choices, such as masking at word and subword level, varying the vocabulary size and testing with domain data, looking for…

Clinical reasoning in medicine is a hypothesis-driven process where physicians refine diagnoses from limited information through targeted history, physical examination, and diagnostic investigations. In contrast, current medical benchmarks…

Machine Learning · Computer Science 2025-10-14 Christopher Chiu , Silviu Pitis , Mihaela van der Schaar

Recent progress in pretraining language models on large textual corpora led to a surge of improvements for downstream NLP tasks. Whilst learning linguistic knowledge, these models may also be storing relational knowledge present in the…

Computation and Language · Computer Science 2019-09-05 Fabio Petroni , Tim Rocktäschel , Patrick Lewis , Anton Bakhtin , Yuxiang Wu , Alexander H. Miller , Sebastian Riedel

With the growing amount of text in health data, there have been rapid advances in large pre-trained models that can be applied to a wide variety of biomedical tasks with minimal task-specific modifications. Emphasizing the cost of these…

In medical image analysis, the expertise scarcity and the high cost of data annotation limits the development of large artificial intelligence models. This paper investigates the potential of transfer learning with pre-trained…

Computer Vision and Pattern Recognition · Computer Science 2024-05-27 Jiajin Zhang , Ge Wang , Mannudeep K. Kalra , Pingkun Yan

In recent years, major advancements in natural language processing (NLP) have been driven by the emergence of large language models (LLMs), which have significantly revolutionized research and development within the field. Building upon…

Computation and Language · Computer Science 2023-05-09 Hazal Türkmen , Oğuz Dikenelli , Cenk Eraslan , Mehmet Cem Çallı , Süha Süreyya Özbek