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Pathology text mining is a challenging task given the reporting variability and constant new findings in cancer sub-type definitions. However, successful text mining of a large pathology database can play a critical role to advance 'big…

Computation and Language · Computer Science 2022-05-17 Thiago Santos , Amara Tariq , Susmita Das , Kavyasree Vayalpati , Geoffrey H. Smith , Hari Trivedi , Imon Banerjee

Despite the wide adoption of Large Language Models (LLM)s, clinical decision support systems face a critical challenge: achieving high predictive accuracy while generating explanations aligned with the predictions. Current approaches suffer…

Artificial Intelligence · Computer Science 2026-05-07 H M Quamran Hasan , Housam Khalifa Bashier , Jiayi Dai , Mi-Young Kim , Randy Goebel

The performance of deep learning-based natural language processing systems is based on large amounts of labeled training data which, in the clinical domain, are not easily available or affordable. Weak supervision and in-context learning…

Computation and Language · Computer Science 2025-04-02 Enshuo Hsu , Kirk Roberts

While large language models (LLMs) hold transformative potential for medicine, their reasoning robustness and safety in real-world clinical scenarios remain critically underexplored, particularly in dentistry. Here we introduce…

The recent success of question answering systems is largely attributed to pre-trained language models. However, as language models are mostly pre-trained on general domain corpora such as Wikipedia, they often have difficulty in…

Computation and Language · Computer Science 2019-09-19 Wonjin Yoon , Jinhyuk Lee , Donghyeon Kim , Minbyul Jeong , Jaewoo Kang

Large pre-trained models have achieved great success in many natural language processing tasks. However, when they are applied in specific domains, these models suffer from domain shift and bring challenges in fine-tuning and online serving…

Computation and Language · Computer Science 2021-06-30 Yunzhi Yao , Shaohan Huang , Wenhui Wang , Li Dong , Furu Wei

Clinical decisions are often required under incomplete information. Clinical experts must identify whether available information is sufficient for judgment, as both premature conclusion and unnecessary abstention can compromise patient…

Artificial Intelligence · Computer Science 2026-02-27 Yusuke Watanabe , Yohei Kobashi , Takeshi Kojima , Yusuke Iwasawa , Yasushi Okuno , Yutaka Matsuo

Recent methods based on pre-trained language models have exhibited superior performance over tabular tasks (e.g., tabular NLI), despite showing inherent problems such as not using the right evidence and inconsistent predictions across…

Computation and Language · Computer Science 2022-10-25 Abhilash Reddy Shankarampeta , Vivek Gupta , Shuo Zhang

Large Language Models (LLMs) have demonstrated significant potential in handling specialized tasks, including medical problem-solving. However, most studies predominantly focus on English-language contexts. This study introduces a novel…

Computation and Language · Computer Science 2025-09-15 Łukasz Grzybowski , Jakub Pokrywka , Michał Ciesiółka , Jeremi I. Kaczmarek , Marek Kubis

Deep learning models in healthcare may fail to generalize on data from unseen corpora. Additionally, no quantitative metric exists to tell how existing models will perform on new data. Previous studies demonstrated that NLP models of…

Computation and Language · Computer Science 2021-02-22 Mihir P. Khambete , William Su , Juan Garcia , Marcus A. Badgeley

Current Large Language Models (LLMs) exhibit significant limitations, notably in structured, interpretable, and verifiable medical reasoning, alongside practical deployment challenges related to computational resources and data privacy.…

Computation and Language · Computer Science 2025-06-06 Boqin Zhuang , Chenxiao Song , Huitong Lu , Jiacheng Qiao , Mingqian Liu , Mingxing Yu , Ping Hong , Rui Li , Xiaoxia Song , Xiangjun Xu , Xu Chen , Yaoyao Ma , Yujie Gao

Progress on commonsense reasoning is usually measured from performance improvements on Question Answering tasks designed to require commonsense knowledge. However, fine-tuning large Language Models (LMs) on these specific tasks does not…

Computation and Language · Computer Science 2022-10-13 Daniel Loureiro , Alípio Mário Jorge

Language models based on deep neural networks have facilitated great advances in natural language processing and understanding tasks in recent years. While models covering a large number of languages have been introduced, their…

Computation and Language · Computer Science 2020-10-23 Li-Hsin Chang , Sampo Pyysalo , Jenna Kanerva , Filip Ginter

The practice of fine-tuning Pre-trained Language Models (PLMs) from general or domain-specific data to a specific task with limited resources, has gained popularity within the field of natural language processing (NLP). In this work, we…

Computation and Language · Computer Science 2023-10-31 Samuel Belkadi , Lifeng Han , Yuping Wu , Goran Nenadic

Large language models (LLMs) have performed well across various clinical natural language processing tasks, despite not being directly trained on electronic health record (EHR) data. In this work, we examine how popular open-source LLMs…

Computation and Language · Computer Science 2025-05-26 Furong Jia , David Sontag , Monica Agrawal

Recent works on large language models (LLMs) have demonstrated the impact of prompting strategies and fine-tuning techniques on their reasoning capabilities. Yet, their effectiveness on clinical natural language inference (NLI) remains…

Computation and Language · Computer Science 2025-07-08 Mael Jullien , Marco Valentino , Leonardo Ranaldi , Andre Freitas

The exponential growth of online textual content across diverse domains has necessitated advanced methods for automated text classification. Large Language Models (LLMs) based on transformer architectures have shown significant success in…

Computation and Language · Computer Science 2025-09-09 Zhyar Rzgar K Rostam , Gábor Kertész

Recently, pre-trained models have achieved state-of-the-art results in various language understanding tasks, which indicates that pre-training on large-scale corpora may play a crucial role in natural language processing. Current…

Computation and Language · Computer Science 2019-11-22 Yu Sun , Shuohuan Wang , Yukun Li , Shikun Feng , Hao Tian , Hua Wu , Haifeng Wang

Neural network models have been very successful in natural language inference, with the best models reaching 90% accuracy in some benchmarks. However, the success of these models turns out to be largely benchmark specific. We show that…

Computation and Language · Computer Science 2019-06-04 Aarne Talman , Stergios Chatzikyriakidis

Language Models (LMs) have performed well on biomedical natural language processing applications. In this study, we conducted some experiments to use prompt methods to extract knowledge from LMs as new knowledge Bases (LMs as KBs). However,…

Information Retrieval · Computer Science 2022-10-24 Zonghai Yao , Yi Cao , Zhichao Yang , Vijeta Deshpande , Hong Yu
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