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We consider the problem of querying a string (or, a database) of length $N$ bits to determine all the locations where a substring (query) of length $M$ appears either exactly or is within a Hamming distance of $K$ from the query. We assume…

Information Theory · Computer Science 2017-04-27 Nagaraj T. Janakiraman , Avinash Vem , Krishna R. Narayanan , Jean-Francois Chamberland

String matching is the problem of deciding whether a given $n$-bit string contains a given $k$-bit pattern. We study the complexity of this problem in three settings. Communication complexity. For small $k$, we provide near-optimal upper…

Computational Complexity · Computer Science 2019-02-21 Alexander Golovnev , Mika Göös , Daniel Reichman , Igor Shinkar

A factor $u$ of a word $w$ is a cover of $w$ if every position in $w$ lies within some occurrence of $u$ in $w$. A word $w$ covered by $u$ thus generalizes the idea of a repetition, that is, a word composed of exact concatenations of $u$.…

Data Structures and Algorithms · Computer Science 2014-01-03 Tomasz Kociumaka , Jakub Radoszewski , Wojciech Rytter , Solon P. Pissis , Tomasz Waleń

We study variants of the mean problem under the $p$-Dynamic Time Warping ($p$-DTW) distance, a popular and robust distance measure for sequential data. In our setting we are given a set of finite point sequences over an arbitrary metric…

Computational Geometry · Computer Science 2022-05-03 Maike Buchin , Anne Driemel , Koen van Greevenbroek , Ioannis Psarros , Dennis Rohde

Permutation Pattern Matching (or PPM) is a decision problem whose input is a pair of permutations $\pi$ and $\tau$, represented as sequences of integers, and the task is to determine whether $\tau$ contains a subsequence order-isomorphic to…

Combinatorics · Mathematics 2016-08-02 Vít Jelínek , Jan Kynčl

In this paper, we present and study the \emph{Hamming distance oracle problem}. In this problem, the task is to preprocess two strings $S$ and $T$ of lengths $n$ and $m$, respectively, to obtain a data-structure that is able to answer…

Data Structures and Algorithms · Computer Science 2024-07-09 Itai Boneh , Dvir Fried , Shay Golan , Matan Kraus

The problem DFA-Intersection-Nonemptiness asks if a given number of deterministic automata accept a common word. In general, this problem is PSPACE-complete. Here, we investigate this problem for the subclasses of commutative automata and…

Formal Languages and Automata Theory · Computer Science 2021-08-12 Henning Fernau , Stefan Hoffmann , Michael Wehar

A regular expression specifies a set of strings formed by single characters combined with concatenation, union, and Kleene star operators. Given a regular expression $R$ and a string $Q$, the regular expression matching problem is to decide…

Data Structures and Algorithms · Computer Science 2023-11-07 Philip Bille , Inge Li Gørtz

Error Tree is a novel tree structure that is mainly oriented to solve the approximate pattern matching problems, Hamming and edit distances, as well as the wildcards matching problem. The input is a text of length $n$ over a fixed alphabet…

Data Structures and Algorithms · Computer Science 2020-08-25 Anas Al-Okaily

A sequence of geometric random variables of length $n$ is a sequence of $n$ independent and identically distributed geometric random variables ($\Gamma_1, \Gamma_2, \dots, \Gamma_n$) where $\mathbb{P}(\Gamma_j=i)=pq^{i-1}$ for…

We study the problem of parameterized matching in a stream where we want to output matches between a pattern of length m and the last m symbols of the stream before the next symbol arrives. Parameterized matching is a natural generalisation…

Data Structures and Algorithms · Computer Science 2012-09-25 Markus Jalsenius , Benny Porat , Benjamin Sach

We study regular expressions that use variables, or parameters, which are interpreted as alphabet letters. We consider two classes of languages denoted by such expressions: under the possibility semantics, a word belongs to the language if…

Formal Languages and Automata Theory · Computer Science 2015-03-19 Pablo Barceló , Leonid Libkin , Juan Reutter

Construct recursively a long string of words w1. .. wn, such that at each step k, w k+1 is a new word with a fixed probability p $\in$ (0, 1), and repeats some preceding word with complementary probability 1 -- p. More precisely, given a…

Probability · Mathematics 2019-06-26 Jean Bertoin

A subsequence of a word $w$ is a word $u$ such that $u = w[i_1] w[i_2] \dots w[i_{k}]$, for some set of indices $1 \leq i_1 < i_2 < \dots < i_k \leq \lvert w\rvert$. A word $w$ is $k$-subsequence universal over an alphabet $\Sigma$ if every…

Formal Languages and Automata Theory · Computer Science 2023-11-20 Duncan Adamson , Pamela Fleischmann , Annika Huch , Tore Koß , Florin Manea , Dirk Nowotka

The main theme of this paper is the enumeration of the occurrence of a pattern in words and permutations. We mainly focus on asymptotic properties of the sequence $f_r^v(k,n),$ the number of $n$-array $k$-ary words that contain a given…

Combinatorics · Mathematics 2019-05-15 Toufik Mansour , Reza Rastegar , Alexander Roitershtein

We consider variations on the following problem: given an NFA M and a pattern p, does there exist an x in L(M) such that p matches x? We consider the restricted problem where M only accepts a finite language. We also consider the variation…

Formal Languages and Automata Theory · Computer Science 2009-06-18 Narad Rampersad , Jeffrey Shallit

We consider avoidance of permutation patterns with designated gap sizes between pairs of consecutive letters. We call the patterns having such constraints distant patterns (DPs) and we show their relation to other pattern notions…

Combinatorics · Mathematics 2021-05-24 Stoyan Dimitrov

Given a text $T$ of length $n$ and a pattern $P$ of length $m$, the string matching problem is a task to find all occurrences of $P$ in $T$. In this study, we propose an algorithm that solves this problem in $O((n + m)q)$ time considering…

Data Structures and Algorithms · Computer Science 2020-04-14 Satoshi Kobayashi , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

We prove an optimal $\Omega(n)$ lower bound on the randomized communication complexity of the much-studied Gap-Hamming-Distance problem. As a consequence, we obtain essentially optimal multi-pass space lower bounds in the data stream model…

Computational Complexity · Computer Science 2012-07-02 Amit Chakrabarti , Oded Regev

Discovering a concise schema from given XML documents is an important problem in XML applications. In this paper, we focus on the problem of learning an unordered schema from a given set of XML examples, which is actually a problem of…

Databases · Computer Science 2015-04-02 Feifei Peng , Haiming Chen
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