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The package fnets for the R language implements the suite of methodologies proposed by Barigozzi et al. (2022) for the network estimation and forecasting of high-dimensional time series under a factor-adjusted vector autoregressive model,…

Computation · Statistics 2023-07-06 Dom Owens , Haeran Cho , Matteo Barigozzi

Even though in recent years the scale of statistical analysis problems has increased tremendously, many statistical software tools are still limited to single-node computations. However, statistical analyses are largely based on dense…

Computation · Statistics 2016-11-01 Rodrigo Canales , Elmar Peise , Paolo Bientinesi

With the advent of high-throughput sequencing (HTS) in molecular biology and medicine, the need for scalable statistical solutions for modeling complex biological systems has become of critical importance. The increasing number of platforms…

Molecular Networks · Quantitative Biology 2022-10-19 Fernando Palluzzi , Mario Grassi

Motivated by the increasing abundance of data describing real-world networks that exhibit dynamical features, we propose an extension of the Exponential Random Graph Models (ERGMs) that accommodates the time variation of its parameters.…

Applications · Statistics 2024-10-17 Domenico Di Gangi , Giacomo Bormetti , Fabrizio Lillo

Version 5.99 of the empirical Gramian framework -- "emgr" -- completes a development cycle which focused on parametric model order reduction of gas network models while preserving compatibility to the previous development for the…

Computational Engineering, Finance, and Science · Computer Science 2022-09-09 Christian Himpe

The regsem package in R, an implementation of regularized structural equation modeling (RegSEM; Jacobucci, Grimm, and McArdle 2016), was recently developed with the goal of incorporating various forms of penalized likelihood estimation in a…

Methodology · Statistics 2017-09-11 Ross Jacobucci

Free and open source software package ecosystems have existed for a long time and are among the most sophisticated human-made systems. One of the oldest and most popular software package ecosystems is CRAN, the repository of packages of the…

Software Engineering · Computer Science 2020-07-16 Marçal Mora-Cantallops , Salvador Sánchez-Alonso , Elena García-Barriocanal

As an alternative to using administrative areas for the evaluation of small-area health inequalities, Sauzet et al. suggested to take an ego-centred approach and model the spatial correlation structure of health outcomes at the individual…

Computation · Statistics 2024-05-14 Julia Dyck , Jan-Ole Koslik , Odile Sauzet

Network inference is a major field of interest for the ecological community, especially in light of the high cost and difficulty of manual observation, and easy availability of remote, long term monitoring data. In addition, comparing…

Quantitative Methods · Quantitative Biology 2021-03-30 Anshuman Swain , Travis Byrum , Zhaoyi Zhuang , Luke Perry , Michael Lin , William Fagan

Exponential random graph models (ERGMs) are widely used for modeling social networks observed at one point in time. However the computational difficulty of ERGM parameter estimation has limited the practical application of this class of…

Methodology · Statistics 2021-11-24 Alex Stivala , Garry Robins , Alessandro Lomi

Structural equation modeling (SEM) is a popular tool in the social and behavioural sciences, where it is being applied to ever more complex data types. The high-dimensional data produced by modern sensors, brain images, or (epi)genetic…

Methodology · Statistics 2019-10-11 Erik-Jan van Kesteren , Daniel L. Oberski

Statistical models for social networks have enabled researchers to study complex social phenomena that give rise to observed patterns of relationships among social actors and to gain a rich understanding of the interdependent nature of…

Methodology · Statistics 2025-09-11 George G. Vega Yon , Andrew Slaughter , Kayla de la Haye

Simulation is widely adopted in the study of modern computer networks. In this context, OMNeT++ provides a set of very effective tools that span from the definition of the network, to the automation of simulation execution and quick result…

Performance · Computer Science 2016-09-16 Antonio Virdis , Carlo Vallati , Giovanni Nardini

Motivation: Elastic net regression is a form of penalized regression that lies between ridge and least absolute shrinkage and selection operator (LASSO) regression. The elastic net penalty is a powerful tool controlling the impact of…

Computation · Statistics 2019-07-02 Peter E. DeWitt , Tellen D. Bennett

The matrixdist R package provides a comprehensive suite of tools for the statistical analysis of matrix distributions, including phase-type, inhomogeneous phase-type, discrete phase-type, and related multivariate distributions. This paper…

Computation · Statistics 2025-03-11 Martin Bladt , Alaric Mueller , Jorge Yslas

We introduce CCMnet, an R package designed to generate network ensembles that accurately reflect the uncertainty inherent in empirical data. While traditional network modeling often results in ensembles with fixed property values or…

Computation · Statistics 2026-03-04 Ravi Goyal , Victor De Gruttola , Natasha K. Martin , Lior Rennert , Jukka-Pekka Onnela

In this paper we propose a novel R package, called rsurv, developed for general survival data simulation purposes. The package is built under a new approach to simulate survival data that depends heavily on the use of dplyr verbs. The…

Computation · Statistics 2024-06-05 Fábio N. Demarqui

Exponential random graph models, or ERGMs, are a flexible and general class of models for modeling dependent data. While the early literature has shown them to be powerful in capturing many network features of interest, recent work…

Methodology · Statistics 2022-01-10 Vishesh Karwa , Sonja Petrović , Denis Bajić

The main purpose of this paper is to introduce a new class of regression models for bounded continuous data, commonly encountered in applied research. The models, named the power logit regression models, assume that the response variable…

Methodology · Statistics 2026-05-15 Francisco Felipe Queiroz , Silvia Lopes Paula Ferrari

Nowadays, exponential random graphs (ERGs) are among the most widely-studied network models. Different analytical and numerical techniques for ERG have been developed that resulted in the well-established theory with true predictive power.…

Physics and Society · Physics 2014-04-08 Agata Fronczak