Related papers: Bijections for Ranked Tree-Child Networks

Let $G$ be a connected graph. The Jacobian group (also known as the Picard group or sandpile group) of $G$ is a finite abelian group whose cardinality equals the number of spanning trees of $G$. The Jacobian group admits a canonical simply…

Both neural networks and decision trees are popular machine learning methods and are widely used to solve problems from diverse domains. These two classifiers are commonly used base classifiers in an ensemble framework. In this paper, we…

We study a new class of networks, generated by sequences of letters taken from a finite alphabet consisting of $m$ letters (corresponding to $m$ types of nodes) and a fixed set of connectivity rules. Recently, it was shown how a binary…

We construct bijections giving three "codes" for trees. These codes follow naturally from the Matrix Tree Theorem of Tutte and have many advantages over the one produced by Prufer in 1918. One algorithm gives explicitly a bijection that is…

Motivated by a recently introduced network growth mechanism that rely on the ranking of node prestige measures [S. Fortunato \emph{et al}., Phys. Rev. Lett. \textbf{96}, 218701 (2006)], a rank-based model for weighted network evolution is…

Inference of species networks from genomic data under the Network Multispecies Coalescent Model is currently severely limited by heavy computational demands. It also remains unclear how complicated networks can be for consistent inference…

The enumeration of linear $\lambda$-terms has attracted quite some attention recently, partly due to their link to combinatorial maps. Zeilberger and Giorgetti (2015) gave a recursive bijection between planar linear normal $\lambda$-terms…

Hybridization networks are representations of evolutionary histories that allow for the inclusion of reticulate events like recombinations, hybridizations, or lateral gene transfers. The recent growth in the number of hybridization network…

We present a bijective algorithm with which an arbitrary permutation decomposes canonically into elementary blocks which we call families, which are sets with a specified number of ascents and descents. We show that families, arranged in an…

This paper considers the enumeration of ternary trees (i.e. rooted ordered trees in which each vertex has 0 or 3 children) avoiding a contiguous ternary tree pattern. We begin by finding recurrence relations for several simple tree…

Based on decision trees, many fields have arguably made tremendous progress in recent years. In simple words, decision trees use the strategy of "divide-and-conquer" to divide the complex problem on the dependency between input features and…

We study random graph models for directed acyclic graphs, an important class of networks that includes citation networks, food webs, and feed-forward neural networks among others. We propose two specific models, roughly analogous to the…

Phylogenetic networks generalize phylogenetic trees in order to model reticulation events. Although the comparison of phylogenetic trees is well studied, and there are multiple ways to do it in an efficient way, the situation is much…

This work addresses an enumeration problem on weighted bi-colored plane trees with prescribed vertex data, with all vertices labeled distinctly. We give a bijection proof of the enumeration formula originally due to Kochetkov, hence…

In evolutionary studies it is common to use phylogenetic trees to represent the evolutionary history of a set of species. However, in case the transfer of genes or other genetic information between the species or their ancestors has…

Phylogenetic trees and networks are leaf-labelled graphs that are used to describe evolutionary histories of species. The Tree Containment problem asks whether a given phylogenetic tree is embedded in a given phylogenetic network. Given a…

We introduce notions of linear reduction and linear equivalence of bijections for the purposes of study bijections between Young tableaux. Originating in Theoretical Computer Science, these notions allow us to give a unified view of a…

The scaling limit of large simple outerplanar maps was established by Caraceni using a bijection due to Bonichon, Gavoille and Hanusse. The present paper introduces a new bijection between outerplanar maps and trees decorated with ordered…

A bijection between ternary trees with $n$ nodes and a subclass of Motzkin paths of length $3n$ is given. This bijection can then be generalized to $t$-ary trees.

We introduce a subfamily of skew Dyck paths called box paths and show that they are in bijection with pairs of ternary trees, confirming an observation stated previously on the On-Line Encyclopedia of Integer Sequences. More generally, we…