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Related papers: Semiflexible polymer enclosed in a 3D compact doma…

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Through extensive Monte Carlo simulations, we systematically study the effect of chain stiffness on the packing ability of linear polymers composed of hard spheres in extremely confined monolayers, corresponding effectively to 2D films.…

A quantum sl(2,R) coalgebra is shown to underly the construction of a large class of superintegrable potentials on 3D curved spaces, that include the non-constant curvature analogues of the spherical, hyperbolic and (anti-)de Sitter spaces.…

Mathematical Physics · Physics 2014-11-18 Angel Ballesteros , Alberto Enciso , Francisco J. Herranz , Orlando Ragnisco

Monte Carlo simulations are used to study the conformational behavior of a semiflexible polymer confined to cylindrical and conical channels. The channels are sufficiently narrow that the conditions for the Odijk regime are marginally…

Soft Condensed Matter · Physics 2020-12-02 James M. Polson , Cameron G. Hastie

A procedure allowing for the construction of Lorentz invariant integrable models living in d+1 dimensional space-time and with an n dimensional target space is provided. Here, integrability is understood as the existence of the generalized…

High Energy Physics - Theory · Physics 2011-04-28 C. Adam , P. Klimas , J. Sanchez-Guillen , A. Wereszczynski

There has been substantial progress in understanding confinement in a class of four-dimensional SU(N) gauge theories using semiclassical methods. These models have one or more compact directions, and much of the analysis is based on the…

High Energy Physics - Theory · Physics 2014-10-08 Michael C. Ogilvie

We analyze a model of hypercubic random surfaces with an extrinsic curvature term in the action. We find a first order phase transition at finite coupling separating a branched polymer from a stable flat phase.

High Energy Physics - Lattice · Physics 2007-05-23 S. Bilke

Engineering synthetic dimensions, where the physics of additional spatial dimensions is simulated within the internal states of a quantum system, allows the realisation of phenomena not otherwise accessible in experiments. Ultracold…

In this paper, we analyze the effect of geometrical constraint on the conformational properties of an infinitely long linear semiflexible polymer chain confined in-between two constraints under good solvent condition in two dimensions. The…

Soft Condensed Matter · Physics 2020-12-29 Pramod Kumar Mishra

Translocation dynamics of an active semi-flexible polymer through a nano-pore into a rigid two dimensional circular cavity, and the polymer packing dynamics have been studied by using Langevin dynamics (LD) simulations. The results show…

Soft Condensed Matter · Physics 2022-11-15 Amir Rezaie-Dereshgi , Hamidreza Khalilian , Jalal Sarabadani

Conformations of a crowded neutral semiflexible polymer under confinement near an attractive wall are studied via coarse-grained simulations. We study the effects of the interplay of the length of the polymer, bending rigidity, and the…

Soft Condensed Matter · Physics 2023-04-25 Kamal Tripathi , Satyavani Vemparala

While stretching of a polymer along a flat surface is hardly different from the classical Pincus problem of pulling chain ends in free space, the role of curved geometry in conformational statistics of the stretched chain is an exciting…

Soft Condensed Matter · Physics 2022-08-30 Kirill E. Polovnikov , Sergei K. Nechaev , Alexander Y. Grosberg

The steady sliding state of periodic structures such as charge density waves and flux line lattices is numerically studied based on two and three dimensional driven random field XY models. We focus on the dynamical phase transition between…

Disordered Systems and Neural Networks · Physics 2009-11-11 Tomoaki Nogawa , Hajime Yoshino , Hiroshi Matsukawa

Three-dimensional (3D) chromatin structure is closely related to genome function, in particular transcription. However, the folding path of the chromatin fiber in the interphase nucleus is unknown. Here, we systematically measured the 3D…

We study equilibrium shapes and shape transformations of a confined semiflexible chain inside a soft lipid tubule using simulations and continuum theories. The deformed tubular shapes and chain conformations depend on the relative magnitude…

Soft Condensed Matter · Physics 2020-06-11 Subhadip Biswas , Buddhapriya Chakrabarti

We analyse the nature of the confinement of an infinitely long (and finite) linear semiflexible homo-polymer chain confined in between two geometrical constraints (A&B) under good solvent condition in two dimensions. The constraints are…

Soft Condensed Matter · Physics 2017-10-16 Pramod Kumar Mishra

The paper presents a short overview of the theoretical, numerical and experimental works on the critical behavior of a dilute polymer solution of long-flexible polymer chains confined in semi-infinite space restricted by a surface or in a…

Soft Condensed Matter · Physics 2018-01-08 Zoryana Usatenko , Krzysztof S. Danel

The probability that a randomly accelerated particle in two dimensions has not yet left a simply connected domain ${\cal A}$ after a time $t$ decays as $e^{-E_0t}$ for long times. The same quantity $E_0$ also determines the confinement free…

Statistical Mechanics · Physics 2009-11-07 D. J. Bicout , T. W. Burkhardt

We study the adsorption of semiflexible polymers such as polyelectrolytes or DNA on planar and curved substrates, e.g., spheres or washboard substrates via short-range potentials using extensive Monte-Carlo simulations, scaling arguments,…

Soft Condensed Matter · Physics 2015-08-19 Tobias A. Kampmann , Horst-Holger Boltz , Jan Kierfeld

Using coherent and squeezed state formalisms of quantum optics for a minimally coupled non-classical inflaton in the FRW mertic is studied, in semiclassical theory of gravity. The leading order solution for the semiclassical Einstein…

General Relativity and Quantum Cosmology · Physics 2009-02-11 K. K. Venkataratnam , P. K. Suresh

We investigate the internal structure of a polymer during collapse from an expanded coil to a compact globule. Collapse is more probable in local regions of high curvature, so a smoothing of the fractal polymer structure occurs that…

Soft Condensed Matter · Physics 2008-11-07 G. E. Crooks , B. Ostrovsky , Y. Bar-Yam