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Different cell types aggregate and sort into hierarchical architectures during the formation of animal tissues. The resulting spatial organization depends (in part) on the strength of adhesion of one cell type to itself relative to other…

Quantitative Methods · Quantitative Biology 2023-08-02 Dhananjay Bhaskar , William Y. Zhang , Alexandria Volkening , Björn Sandstede , Ian Y. Wong

A theory of modules over posets is developed to define computationally feasible, topologically interpretable data structures, in terms of birth and death of homology classes, for persistent homology with multiple real parameters. To replace…

Algebraic Topology · Mathematics 2020-08-13 Ezra Miller

In this paper, we introduce a novel persistence framework for Morse decompositions in Markov chains using combinatorial multivector fields. Our approach provides a structured method to analyze recurrence and stability in finite-state…

Dynamical Systems · Mathematics 2025-03-31 Donald Woukeng

For a pointed topological space $X$, we use an inductive construction of a simplicial resolution of $X$ by wedges of spheres to construct a "higher homotopy structure" for $X$ (in terms of chain complexes of spaces). This structure is then…

Algebraic Topology · Mathematics 2021-11-10 David Blanc , Mark W. Johnson , James M. Turner

We present a distributed algorithm to compute the first homology of a simplicial complex. Such algorithms are very useful in topological analysis of sensor networks, such as its coverage properties. We employ spanning trees to compute a…

Algebraic Topology · Mathematics 2013-06-06 Harish Chintakunta , Hamid Krim

Persistence diagrams have been widely used to quantify the underlying features of filtered topological spaces in data visualization. In many applications, computing distances between diagrams is essential; however, computing these distances…

Computational Geometry · Computer Science 2021-08-12 Yu Qin , Brittany Terese Fasy , Carola Wenk , Brian Summa

We study the categorical framework for the computation of persistent homology, without reliance on a particular computational algorithm. The computation of persistent homology is commonly summarized as a matrix theorem, which we call the…

Algebraic Topology · Mathematics 2018-10-02 Killian Meehan , Andrei Pavlichenko , Jan Segert

Homological algebra of modules over posets is developed, as closely parallel as possible to that of finitely generated modules over noetherian commutative rings, in the direction of finite presentations and resolutions. Centrally at issue…

Algebraic Topology · Mathematics 2020-08-12 Ezra Miller

Discrete cubical homology arose as the homology theory associated with discrete cubical homotopy theory. Despite the combinatorial nature of this homology, its computation has posed a significant challenge to the researchers in the field.…

Algebraic Topology · Mathematics 2026-05-13 Samira Sahar Jamil , P Christopher Staecker , Danish Ali

We propose a novel graph clustering method guided by additional information on the underlying structure of the clusters (or communities). The problem is formulated as the matching of a graph to a template with smaller dimension, hence…

Machine Learning · Statistics 2021-07-06 Mateus Riva , Florian Yger , Pietro Gori , Roberto M. Cesar , Isabelle Bloch

In this paper we survey three approaches to computing the homology of a finite dimensional compact smooth closed manifold using a Morse-Bott function and discuss relationships among the three approaches. The first approach is to perturb the…

Algebraic Topology · Mathematics 2015-03-20 David E. Hurtubise

We introduce a new topological invariant of complex line arrangements in the complex projective plane, derived from the interaction between their complement and the boundary of a regular neighbourhood. The motivation is to identify Zariski…

Geometric Topology · Mathematics 2026-05-29 Adrien Rodau

We develop a general theory of cluster categories, applying to a 2-Calabi-Yau extriangulated category $\mathcal{C}$ and cluster-tilting subcategory $\mathcal{T}$ satisfying only mild finiteness conditions. We show that the structure theory…

Representation Theory · Mathematics 2025-12-01 Jan E. Grabowski , Matthew Pressland

Topological invariants, including the Chern numbers, can topologically classify parameterized Hamiltonians. We find that topological invariants can be properly defined and calculated even if the parameter space is discrete, which is done by…

Mesoscale and Nanoscale Physics · Physics 2023-11-21 Youjiang Xu , Walter Hofstetter

The Witten index for certain supersymmetric lattice models treated by de Boer, van Eerten, Fendley, and Schoutens, can be formulated as a topological invariant of simplicial complexes arising as independence complexes of graphs. We prove a…

Strongly Correlated Electrons · Physics 2008-05-16 Alexander Engstrom

The analysis of global dynamics, particularly the identification and characterization of attractors and their regions of attraction, is essential for complex nonlinear and hybrid systems. Combinatorial methods based on Conley's index theory…

Dynamical Systems · Mathematics 2025-11-13 Bernardo Rivas , Kaito Iwasaki , William Kalies , Anthony Bloch , Maani Ghaffari

We introduce a filtration on the simplicial homology of a finite simplicial complex X using bi-colourings of its vertices. This yields two dual homology theories closely related to discrete Morse matchings on X. We give an explicit…

Combinatorics · Mathematics 2022-12-05 Daniele Celoria

The manifold hypothesis, which assumes that data lies on or close to an unknown manifold of low intrinsic dimension, is a staple of modern machine learning research. However, recent work has shown that real-world data exhibits distinct…

Machine Learning · Computer Science 2023-06-16 Julius von Rohrscheidt , Bastian Rieck

These course notes are about computing modular forms and some of their arithmetic properties. Their aim is to explain and prove the modular symbols algorithm in as elementary and as explicit terms as possible, and to enable the devoted…

Number Theory · Mathematics 2018-09-14 Gabor Wiese

Our main objective is to demonstrate how homological perturbation theory (HPT) results over the last 40 years immediately or with little extra work give some of the Koszul duality results that have appeared in the last decade. Higher…

Algebraic Topology · Mathematics 2009-07-31 Johannes Huebschmann
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