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In this paper we present a new approach to computing homology (with field coefficients) and persistent homology. We use concepts from discrete Morse theory, to provide an algorithm which can be expressed solely in terms of simple graph…

Algebraic Topology · Mathematics 2012-10-26 Paweł Dłotko , Hubert Wagner

Accurate delineation of fine-scale structures is a very important yet challenging problem. Existing methods use topological information as an additional training loss, but are ultimately making pixel-wise predictions. In this paper, we…

Image and Video Processing · Electrical Eng. & Systems 2022-10-04 Xiaoling Hu , Dimitris Samaras , Chao Chen

We consider the problem of efficiently computing a discrete Morse complex on simplicial complexes of arbitrary dimension and very large size. Based on a common graph-based formalism, we analyze existing data structures for simplicial…

Computational Geometry · Computer Science 2018-11-13 Ulderico Fugacci , Federico Iuricich , Leila De Floriani

We study Morse theory on noncompact manifolds equipped with exhaustions by compact pieces, defining the Morse homology of a pair which consists of the manifold and related geometric/homotopy data. We construct a collection of Morse data…

Geometric Topology · Mathematics 2019-11-12 Taesu Kim

The Discrete Morse Theory of Forman appeared to be useful for providing filtration-preserving reductions of complexes in the study of persistent homology. So far, the algorithms computing discrete Morse matchings have only been used for…

Computational Geometry · Computer Science 2015-03-13 Madjid Allili , Tomasz Kaczynski , Claudia Landi

1) We introduce random discrete Morse theory as a computational scheme to measure the complicatedness of a triangulation. The idea is to try to quantify the frequence of discrete Morse matchings with a certain number of critical cells. Our…

Computational Geometry · Computer Science 2014-04-21 Bruno Benedetti , Frank H. Lutz

The connection matrix is a powerful algebraic topological tool from Conley index theory that captures relationships between isolated invariant sets. Conley index theory is a topological generalization of Morse theory in which the connection…

Algebraic Topology · Mathematics 2021-06-30 Shaun Harker , Konstantin Mischaikow , Kelly Spendlove

The combination of persistent homology and discrete Morse theory has proven very effective in visualizing and analyzing big and heterogeneous data. Indeed, topology provides computable and coarse summaries of data independently from…

Computational Geometry · Computer Science 2021-02-12 Claudia Landi , Sara Scaramuccia

In the context of discrete Morse theory, we introduce Morse frames, which are maps that associate a set of critical simplexes to all simplexes. The main example of Morse frames are the Morse references. In particular, these Morse references…

Discrete Mathematics · Computer Science 2026-03-30 Gilles Bertrand , Laurent Najman

This technical report introduces a novel approach to efficient computation in homological algebra over fields, with particular emphasis on computing the persistent homology of a filtered topological cell complex. The algorithms here…

Algebraic Topology · Mathematics 2017-10-18 Gregory Henselman , Robert Ghrist

In many scenarios, especially biomedical applications, the correct delineation of complex fine-scaled structures such as neurons, tissues, and vessels is critical for downstream analysis. Despite the strong predictive power of deep learning…

Computer Vision and Pattern Recognition · Computer Science 2024-03-25 Xiaoling Hu

Persistent Homology (PH) allows tracking homology features like loops, holes and their higher-dimensional analogs, along with a single-parameter family of nested spaces. Currently, computing descriptors for complex data characterized by…

Computational Geometry · Computer Science 2020-10-19 Sara Scaramuccia , Federico Iuricich , Leila De Floriani , Claudia Landi

Computing homology and cohomology is at the heart of many recent works and a key issue for topological data analysis. Among homological objects, homology generators are useful to locate or understand holes (especially for geometric…

Algebraic Topology · Mathematics 2025-12-22 Yann-Situ Gazull , Aldo Gonzalez-Lorenzo , Alexandra Bac

We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…

Algebraic Topology · Mathematics 2013-03-05 Ulrich Bauer , Michael Kerber , Jan Reininghaus

We study the problem of computing the homology of the configuration spaces of a finite cell complex $X$. We proceed by viewing $X$, together with its subdivisions, as a subdivisional space--a kind of diagram object in a category of cell…

Algebraic Topology · Mathematics 2021-01-11 Byung Hee An , Gabriel C. Drummond-Cole , Ben Knudsen

A classical result in Morse theory is the determination of the homotopy type of the loop space of a manifold. In this paper, we study this result through the lens of discrete Morse theory. This requires a suitable simplicial model for the…

Algebraic Topology · Mathematics 2024-07-18 Lacey Johnson , Kevin Knudson

The computation of homology groups for evolving simplicial complexes often requires repeated reconstruction of boundary operators, resulting in prohibitive costs for large-scale or frequently updated data. This work introduces MMHM, a…

Computational Geometry · Computer Science 2025-08-21 Anqiao Ouyang

We show how to construct homology bases for certain CW complexes in terms of discrete Morse theory and cellular homology. We apply this technique to study certain subcomplexes of the half cube polytope studied in previous works. This…

Geometric Topology · Mathematics 2014-10-01 R. M. Green , Jacob T. Harper

A central problem in topological data analysis is that of computing the homology of a given simplicial complex. Said complexes can have arbitrary large number of simplices, as can happen, for example, if the space is the Rips-Vietoris or…

Combinatorics · Mathematics 2021-11-11 Francisco Martinez-Figueroa

Given a poset-graded chain complex of vector spaces, a Conley complex is the minimal chain-homotopic reduction of the initial complex that respects the poset grading. A connection matrix is a matrix representing the differential of the…

Algebraic Topology · Mathematics 2026-05-06 Álvaro Torras-Casas , Ka Man Yim , Ulrich Pennig
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