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We introduce a new graphical model for tracking radio-tagged animals and learning their movement patterns. The model provides a principled way to combine radio telemetry data with an arbitrary set of userdefined, spatial features. We…

Machine Learning · Computer Science 2012-03-19 Berk Kapicioglu , Robert E. Schapire , Martin Wikelski , Tamara Broderick

Fine particulate matter (PM$_{2.5}$) has become a great concern worldwide due to its adverse health effects. PM$_{2.5}$ concentrations typically exhibit complex spatio-temporal variations. Both the mean and the spatio-temporal dependence…

Methodology · Statistics 2022-02-25 Ghulam A. Qadir , Ying Sun

Remote sensing observations are extensively used for analysis of environmental variables. These variables often exhibit spatial correlation, which has to be accounted for in the calibration models used in predictions, either by direct…

Applications · Statistics 2017-02-14 Virpi Junttila , Marko Laine

Spatio-temporal data and processes are prevalent across a wide variety of scientific disciplines. These processes are often characterized by nonlinear time dynamics that include interactions across multiple scales of spatial and temporal…

Machine Learning · Statistics 2017-08-18 Patrick L. McDermott , Christopher K. Wikle

With the advancement of GPS and remote sensing technologies, large amounts of geospatial and spatiotemporal data are being collected from various domains, driving the need for effective and efficient prediction methods. Given spatial data…

Machine Learning · Computer Science 2020-12-25 Zhe Jiang

Spatiotemporal data mining (STDM) discovers useful patterns from the dynamic interplay between space and time. Several available surveys capture STDM advances and report a wealth of important progress in this field. However, STDM challenges…

Machine Learning · Computer Science 2021-04-01 Ali Hamdi , Khaled Shaban , Abdelkarim Erradi , Amr Mohamed , Shakila Khan Rumi , Flora Salim

In this paper we present GeoThinneR, an R package for efficient and flexible spatial thinning of species occurrence data. Spatial thinning is a widely used preprocessing step in species distribution modeling (SDM) that can help reduce…

Populations and Evolution · Quantitative Biology 2025-05-14 J. Mestre-Tomás

Variance partitioning methods, which are built upon multivariate statistics, have been widely applied in different taxa and habitats in community ecology. Here, I performed a literature review on the development and application of the…

Populations and Evolution · Quantitative Biology 2014-03-31 Youhua Chen

The spread of invasive species can have far reaching environmental and ecological consequences. Understanding invasion spread patterns and the underlying process driving invasions are key to predicting and managing invasions. We combine a…

Methodology · Statistics 2018-10-12 Joshua Goldstein , Jaewoo Park , Murali Haran , Andrew Liebhold , Ottar N. Bjornstad

Evaluating the predictive performance of species distribution models (SDMs) under realistic deployment scenarios requires careful handling of spatial and temporal dependencies in the data. Cross-validation (CV) is the standard approach for…

Applications · Statistics 2025-12-22 Diana Koldasbayeva , Alexey Zaytsev

Convergent evolution provides a useful framework for testing whether independent origins of similar traits share common genetic mechanisms. Evolutionary Sparse Learning with Paired Species Contrast (ESL-PSC) is an approach to identify genes…

Populations and Evolution · Quantitative Biology 2026-05-28 John B. Allard , Sudhir Kumar

This article introduces novel and practicable Bayesian factor analysis frameworks that are computationally feasible for moderate to large spatiotemporal data. Previous Bayesian analysis of spatiotemporal data has utilized a Bayesian factor…

Methodology · Statistics 2025-02-18 Yifan Cheng , Cheng Li

1. The utilisation distribution describes the relative probability of use of a spatial unit by an animal. It is natural to think of it as the long-term consequence of the animal's short-term movement decisions: it is the accumulation of…

Applications · Statistics 2018-10-25 Théo Michelot , Marie-Pierre Etienne , Pierre Gloaguen

Understanding the spread of any disease is a highly complex and interdisciplinary exercise as biological, social, geographic, economic, and medical factors may shape the way a disease moves through a population and options for its eventual…

Populations and Evolution · Quantitative Biology 2016-12-14 Aristides Moustakas

An R package SpatialPack that implements routines to compute point estimators and perform hypothesis testing of the spatial association between two stochastic sequences is introduced. These methods address the spatial association between…

Applications · Statistics 2016-11-17 Felipe Osorio , Ronny Vallejos , Francisco Cuevas

Genomic regions (or loci) displaying outstanding correlation with some environmental variables are likely to be under selection and this is the rationale of recent methods of identifying selected loci and retrieving functional information…

Populations and Evolution · Quantitative Biology 2013-08-13 Gilles Guillot

Spatiotemporal dynamics models are fundamental for various domains, from heat propagation in materials to oceanic and atmospheric flows. However, currently available neural network-based spatiotemporal modeling approaches fall short when…

Machine Learning · Computer Science 2025-02-11 Valerii Iakovlev , Harri Lähdesmäki

Accurately forecasting urban development and its environmental and climate impacts critically depends on realistic models of the spatial structure of the built environment, and of its dependence on key factors such as population and…

Machine Learning · Computer Science 2019-07-24 Adrian Albert , Jasleen Kaur , Emanuele Strano , Marta Gonzalez

Environmental data science for spatial extremes has traditionally relied heavily on max-stable processes. Even though the popularity of these models has perhaps peaked with statisticians, they are still perceived and considered as the…

Methodology · Statistics 2024-02-01 Raphaël Huser , Thomas Opitz , Jennifer Wadsworth

Time series forecasting is essential for our daily activities and precise modeling of the complex correlations and shared patterns among multiple time series is essential for improving forecasting performance. Spatial-Temporal Graph Neural…

Machine Learning · Computer Science 2024-06-19 Yue Jiang , Xiucheng Li , Yile Chen , Shuai Liu , Weilong Kong , Antonis F. Lentzakis , Gao Cong