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Annotation is a major hurdle in the semantic segmentation of microscopy images and volumes due to its prerequisite expertise and effort. This work enables the training of semantic segmentation networks on images with only a single point for…

Computer Vision and Pattern Recognition · Computer Science 2021-03-22 Shijie Li , Neel Dey , Katharina Bermond , Leon von der Emde , Christine A. Curcio , Thomas Ach , Guido Gerig

Explaining the foundations for predictions obtained from graph neural networks (GNNs) is critical for credible use of GNN models for real-world problems. Owing to the rapid growth of GNN applications, recent progress in explaining…

Machine Learning · Computer Science 2025-01-07 Hyeoncheol Cho , Youngrock Oh , Eunjoo Jeon

We consider a neural network (NN) that may experience memory faults and computational errors. In this paper, we propose a novel real-number-based error correction code (ECC) capable of detecting and correcting both memory errors and…

Neural and Evolutionary Computing · Computer Science 2026-02-03 Ziqing Li , Myung Cho , Qiutong Jin , Weiyu Xu

With recent advances in deep learning, neuroimaging studies increasingly rely on convolutional networks (ConvNets) to predict diagnosis based on MR images. To gain a better understanding of how a disease impacts the brain, the studies…

Machine Learning · Computer Science 2021-06-29 Qingyu Zhao , Ehsan Adeli , Adolf Pfefferbaum , Edith V. Sullivan , Kilian M. Pohl

Retinal vessel information is helpful in retinal disease screening and diagnosis. Retinal vessel segmentation provides useful information about vessels and can be used by physicians during intraocular surgery and retinal diagnostic…

Computer Vision and Pattern Recognition · Computer Science 2018-02-23 M. Hajabdollahi , R. Esfandiarpoor , S. M. R. Soroushmehr , N. Karimi , S. Samavi , K. Najarian

The use of neural networks for diagnosis classification is becoming more and more prevalent in the medical imaging community. However, deep learning method outputs remain hard to explain. Another difficulty is to choose among the large…

Image and Video Processing · Electrical Eng. & Systems 2020-02-11 Elina Thibeau Sutre , Olivier Colliot , Didier Dormont , Ninon Burgos

Convolutional neural networks (CNNs) show outstanding performance in many image processing problems, such as image recognition, object detection and image segmentation. Semantic segmentation is a very challenging task that requires…

Computer Vision and Pattern Recognition · Computer Science 2019-07-12 Fan Jia , Jun Liu , Xue-cheng Tai

Detecting local features, such as corners, segments or blobs, is the first step in the pipeline of many Computer Vision applications. Its speed is crucial for real-time applications. In this paper we present ELSED, the fastest line segment…

Computer Vision and Pattern Recognition · Computer Science 2021-12-22 Iago Suárez , José M. Buenaposada , Luis Baumela

Registration is a fundamental task in medical image analysis which can be applied to several tasks including image segmentation, intra-operative tracking, multi-modal image alignment, and motion analysis. Popular registration tools such as…

Computer Vision and Pattern Recognition · Computer Science 2019-10-07 Wentao Zhu , Andriy Myronenko , Ziyue Xu , Wenqi Li , Holger Roth , Yufang Huang , Fausto Milletari , Daguang Xu

Brain science is an evolving research area inviting great enthusiasm with its potential for providing insights and thereby, preventing, and treating multiple neuronal disorders affecting millions of patients. Discovery of relationships,…

Neurons and Cognition · Quantitative Biology 2016-03-17 Bisakha Ray , Alexander V. Alekseyenko , Sisi Ma , Alexander Statnikov , Constantin Aliferis

Vision language models (VLMs) are increasingly capable of reasoning over images, but robust visual reasoning often requires re-grounding intermediate steps in the underlying visual evidence. Recent approaches typically rely on external…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Zeru Shi , Kai Mei , Yihao Quan , Dimitris N. Metaxas , Ruixiang Tang

Purpose: To implement a brain segmentation pipeline based on convolutional neural networks, which rapidly segments 3D volumes into 27 anatomical structures. To provide an extensive, comparative study of segmentation performance on various…

Image and Video Processing · Electrical Eng. & Systems 2020-08-12 Jonathan Zopes , Moritz Platscher , Silvio Paganucci , Christian Federau

Graphs are a useful abstraction of image content. Not only can graphs represent details about individual objects in a scene but they can capture the interactions between pairs of objects. We present a method for training a convolutional…

Computer Vision and Pattern Recognition · Computer Science 2018-03-28 Alejandro Newell , Jia Deng

Accurate segmentation of vascular networks is essential for computer-aided tools designed to address cardiovascular diseases. Despite more than thirty years of research, it remains a challenge to obtain vascular segmentation results that…

Image and Video Processing · Electrical Eng. & Systems 2024-08-23 Sophie Carneiro-Esteves , Antoine Vacavant , Odyssée Merveille

This paper presents a method for automatic segmentation, localization, and identification of vertebrae in arbitrary 3D CT images. Many previous works do not perform the three tasks simultaneously even though requiring a priori knowledge of…

Image and Video Processing · Electrical Eng. & Systems 2020-10-01 Naoto Masuzawa , Yoshiro Kitamura , Keigo Nakamura , Satoshi Iizuka , Edgar Simo-Serra

Many studies regarding the vasculature of biological tissues involve the segmentation of the blood vessels in a sample followed by the creation of a graph structure to model the vasculature. The graph is then used to extract relevant…

Computer Vision and Pattern Recognition · Computer Science 2024-06-21 João Pedro Parella , Matheus Viana da Silva , Cesar Henrique Comin

Referring Expression Comprehension (REC) aims to localize the image region corresponding to a natural language query. Recent neuro-symbolic REC approaches leverage large language models (LLMs) and vision-language models (VLMs) to perform…

Artificial Intelligence · Computer Science 2026-03-23 Hyejin Park , Junhyuk Kwon , Suha Kwak , Jungseul Ok

Representation learning for graphs enables the application of standard machine learning algorithms and data analysis tools to graph data. Replacing discrete unordered objects such as graph nodes by real-valued vectors is at the heart of…

Machine Learning · Computer Science 2021-02-10 Konstantin Kutzkov

Protein-ligand scoring is an important step in a structure-based drug design pipeline. Selecting a correct binding pose and predicting the binding affinity of a protein-ligand complex enables effective virtual screening. Machine learning…

Machine Learning · Statistics 2020-10-19 Joshua Hochuli , Alec Helbling , Tamar Skaist , Matthew Ragoza , David Ryan Koes

Deep neural networks are increasingly being used as controllers for safety-critical systems. Because neural networks are opaque, certifying their correctness is a significant challenge. To address this issue, several neural network…

Formal Languages and Automata Theory · Computer Science 2020-07-22 Yizhak Yisrael Elboher , Justin Gottschlich , Guy Katz