English
Related papers

Related papers: Amplified steady state bifurcations in feedforward…

200 papers

This work addresses whether a reaction network, taken with mass-action kinetics, is multistationary, that is, admits more than one positive steady state in some stoichiometric compatibility class. We build on previous work on the effect…

Molecular Networks · Quantitative Biology 2019-08-27 AmirHosein Sadeghimanesh , Elisenda Feliu

Real-world growth processes and scalings have been broadly categorized into three growth regimes with distinctly different properties and driving forces. The first two are characterized by a positive and constant feedback between growth and…

Physics and Society · Physics 2025-03-20 Alain Govaert , André Teixeira , Emma Tegling

In this paper, the commensurate fractional-order variant of an Hopfield neuronal network is analyzed. The system is integrated with the ABM method for fractional-order equations. Beside the standard stability analysis of equilibria, the…

Numerical Analysis · Mathematics 2021-07-28 Marius-F. Danca

In this paper, we abstract a kind of stochastic processes from evolving processes of growing networks, this process is called growing network Markov chains. Thus the existence and the formulas of degree distribution are transformed to the…

Mathematical Physics · Physics 2015-05-13 Zhenting Hou , Xiangxing Kong , Dinghua Shi , Guanrong Chen , Qinggui Zhao

The connection between network topology and stability remains unclear. General approaches that clarify this relationship and allow for more efficient stability analysis would be desirable. Inspired by chemical reaction networks, I…

Chaotic Dynamics · Physics 2013-09-27 Ali Kinkhabwala

Aggregations are emergent features common to many biological systems. Mathematical models to understand their emergence are consequently widespread, with the aggregation-diffusion equation being a prime example. Here we study the…

Analysis of PDEs · Mathematics 2023-09-28 Jonathan R. Potts , Kevin J. Painter

Dynamical emergent patterns of swarms are now fairly well established in nature, and include flocking and rotational states. Recently, there has been great interest in engineering and physics to create artificial self-propelled agents that…

Adaptation and Self-Organizing Systems · Physics 2020-05-20 Ira B Schwartz , Victoria Edwards , Sayomi Kamimoto , Klimka Kasraie , Ioana Triandaf , M. Ani Hsieh , Jason Hindes

The analysis on stability and bifurcations in the macroscopic dynamics exhibited by the system of two coupled large populations comprised of $N$ stochastic excitable units each is performed by studying an approximate system, obtained by…

Chaotic Dynamics · Physics 2015-06-11 I. Franovic , K. Todorovic , N. Vasovic , N. Buric

Models of growing networks are a central topic in network science. In these models, vertices are usually labeled by their arrival time, distinguishing even those node pairs whose structural roles are identical. In contrast, unlabeled…

Physics and Society · Physics 2025-09-23 Harrison Hartle , Brennan Klein , Dmitri Krioukov , P. L. Krapivsky

Spatiotemporal patterns are common in biological systems. For electrically-coupled cells previous studies of pattern formation have mainly used external forcing as the main bifurcation parameter. The purpose of this paper is to show that…

Dynamical Systems · Mathematics 2021-11-02 H. O. Fatoyinbo , R. G. Brown , D. J. W. Simpson , B. van Brunt

Amplitude expansions are used to determine steady states of a semi-infinite solid subject to the Grinfeld instability in systems with a fixed (wave)length. We present two methods to obtain high-order weakly nonlinear results. Using the…

Condensed Matter · Physics 2021-09-15 Peter Kohlert , Klaus Kassner , Chaouqi Misbah

Many biological systems, such as metabolic pathways, exhibit bistability behavior: these biological systems exhibit two distinct stable states with switching between the two stable states controlled by certain conditions. Since…

Quantitative Methods · Quantitative Biology 2013-07-04 Yi Ming Zou

A coupled cell network is a model for many situations such as food webs in ecosystems, cellular metabolism, economical networks... It consists in a directed graph $G$, each node (or cell) representing an agent of the network and each…

Dynamical Systems · Mathematics 2015-05-27 Romain Joly

Symmetry-breaking instabilities play an important role in understanding the mechanisms underlying the diversity of patterns observed in nature, such as in Turing's reaction--diffusion theory, which connects cellular signalling and transport…

Pattern Formation and Solitons · Physics 2023-12-25 Andrew L. Krause , Eamonn A. Gaffney , Thomas Jun Jewell , Václav Klika , Benjamin J. Walker

We consider a one-dimensional directional array of diffusively coupled oscillators. They are perturbed by the injection of a small additive noise, typically orders of magnitude smaller than the oscillation amplitude, and the system is…

Disordered Systems and Neural Networks · Physics 2019-01-09 Clement Zankoc , Duccio Fanelli , Francesco Ginelli , Roberto Livi

While synchronized states, and the dynamical pathways through which they emerge, are often regarded as the paradigm to understand the dynamics of information spreading on undirected networks of nonlinear dynamical systems, when we consider…

Adaptation and Self-Organizing Systems · Physics 2025-07-10 Giulio Colombini , Nicola Guglielmi , Armando Bazzani

We study a mathematical model describing the dynamics of a pluripotent stem cell population involved in the blood production process in the bone marrow. This model is a differential equation with a time delay. The delay describes the cell…

Analysis of PDEs · Mathematics 2009-04-17 Mostafa Adimy , Fabien Crauste , Shigui Ruan

Networked dynamical systems, i.e., systems of dynamical units coupled via nontrivial interaction topologies, constitute models of broad classes of complex systems, ranging from gene regulatory and metabolic circuits in our cells to…

Adaptation and Self-Organizing Systems · Physics 2024-03-12 Xiaozhu Zhang , Marc Timme

Logistic functions are good models of biological population growth. They are also popular in marketing in modelling demand-supply curves and in a different context, to chart the sales of new products over time. Delays being inherent in any…

Populations and Evolution · Quantitative Biology 2012-11-30 Milind M. Rao , K. L. Preetish

It is becoming increasingly appreciated that the signal transduction systems used by eukaryotic cells to achieve a variety of essential responses represent highly complex networks rather than simple linear pathways. While significant effort…

Molecular Networks · Quantitative Biology 2009-11-10 Kevin S. Brown , Colin C. Hill , Guillermo A. Calero , Kelvin H. Lee , James P. Sethna , Richard A. Cerione