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This paper describes methodological details used by WHO in 2015 to estimate TB incidence, prevalence and mortality. Incidence and mortality are disaggregated by HIV status, age and sex. Methods to derive MDR-TB burden indicators are…

Quantitative Methods · Quantitative Biology 2016-03-02 Glaziou Philippe , Sismanidis Charalambos , Pretorius Carel , Floyd Katherine

This paper introduces semiparametric relative-risk regression models for infectious disease data based on contact intervals, where the contact interval from person i to person j is the time between the onset of infectiousness in i and…

Methodology · Statistics 2023-10-24 Eben Kenah

In large-scale disease etiology studies, epidemiologists often need to use multiple binary measures of unobserved causes of disease that are not perfectly sensitive or specific to estimate cause-specific case fractions, referred to as…

Methodology · Statistics 2019-06-21 Zhenke Wu , Irena Chen

Aims: A common objective of epidemiological surveys is to provide population-level estimates of health indicators. Survey results tend to be biased under selective non-participation. One approach to bias reduction is to collect information…

This paper proposes a neuro-rough model based on multi-layered perceptron and rough set. The neuro-rough model is then tested on modelling the risk of HIV from demographic data. The model is formulated using Bayesian framework and trained…

Artificial Intelligence · Computer Science 2007-08-28 Tshilidzi Marwala , Bodie Crossingham

Count data, for example the number of observed cases of a disease in a city, often arise in the fields of healthcare analytics and epidemiology. In this paper, we consider performing regression on multivariate data in which our outcome is a…

Machine Learning · Statistics 2015-05-21 T. J. Massaro , H. Bozdogan

Random mixing in host populations has been a convenient simplifying assumption in the study of epidemics, but neglects important differences in contact rates within and between population groups. For HIV/AIDS, the assumption of random…

Quantitative Methods · Quantitative Biology 2016-02-24 Brian G. Williams , Christopher Dye

Introduction: The value of integrating federal HIV services data with HIV surveillance is currently unknown. Upstream and complete case capture is essential in preventing future HIV transmission. Methods: This study integrated Ryan White,…

Machine Learning · Computer Science 2023-04-21 Nick Williams

A two-sex Basic Reproduction Number (BRN) is used to investigate the conditions under which the Human Immunodeficiency Virus (HIV) may spread through heterosexual contacts in Sub-Saharan Africa. (The BRN is the expected number of new…

Applications · Statistics 2007-07-05 Marc Artzrouni , Vivient Kamla

We study the global dynamics of a SICA infection model with general incidence rate. The proposed model is calibrated with cumulative cases of infection by HIV-AIDS in Morocco from 1986 to 2015. We first prove that our model is biologically…

Populations and Evolution · Quantitative Biology 2019-08-12 El Mehdi Lotfi , Marouane Mahrouf , Mehdi Maziane , Cristiana J. Silva , Delfim F. M. Torres , Noura Yousfi

We present CRISP (COVID-19 Risk Score Prediction), a probabilistic graphical model for COVID-19 infection spread through a population based on the SEIR model where we assume access to (1) mutual contacts between pairs of individuals across…

Social and Information Networks · Computer Science 2022-07-04 Ralf Herbrich , Rajeev Rastogi , Roland Vollgraf

The minimum description length (MDL) principle states that the best model to account for some data minimizes the sum of the lengths, in bits, of the descriptions of the model and the residual error. The description length is thus a…

Quantitative Methods · Quantitative Biology 2015-07-21 Peter T. Hraber , Bette T. Korber , Steven Wolinsky , Henry A. Erlich , Elizabeth A. Trachtenberg , Thomas B. Kepler

Assessment of circulating CD4 count change over time in HIV-infected subjects on antiretroviral therapy (ART) is a central component of disease monitoring. The increasing number of HIV-infected subjects starting therapy and the limited…

HIV-1C is the most prevalent subtype of HIV-1 and accounts for over half of HIV-1 infections worldwide. Host genetic influence of HIV infection has been previously studied in HIV-1B, but little attention has been paid to the more prevalent…

Methodology · Statistics 2017-06-13 Denis Agniel , Wen Xie , Myron Essex , Tianxi Cai

Background: We estimated the potential number of newly diagnosed HIV infections among adolescent girls and young women (AGYW) using a venue-based approach to HIV testing at sex work hotspots. Methods: We used hotspot enumeration and…

A stochastic epidemic model accounting for the effect of contact-tracing on the spread of an infectious disease is studied. Precisely, individuals identified as infected may contribute to detecting other infectious individuals by providing…

Probability · Mathematics 2009-03-28 Stéphan Clémençon , Viet Chi Tran , Hector De Arazoza

Men who have sex with men (MSM) remain disproportionately affected by HIV, yet optimizing Pre-exposure Prophylaxis (PrEP) distribution remains a public health challenge. Current guidelines and most modelling studies do not incorporate…

Physics and Society · Physics 2026-03-17 João Brázia , István Z. Kiss , Alexandre P. Francisco , Andreia Sofia Teixeira

This paper describes a novel approach to modeling homphily, i.e. the tendency of nodes that share (or differ in) certain attributes to be linked; we consider dynamic networks in which nodes can be added over time but not removed. Our…

Genomics · Quantitative Biology 2022-01-13 V. DeGruttola , M. Nakazawa , J. Liu , X. Tu , S. Little , S. Mehta

People living with HIV face a high burden of comorbidities, yet early detection is often limited by symptom-driven screening. We evaluate the potential of AI to predict multiple comorbidities from routinely collected Electronic Health…

Computers and Society · Computer Science 2025-09-01 Solomon Russom , Dimitrios Kollias , Qianni Zhang

Respondent-driven sampling (RDS) is a procedure to sample from hard-to-reach populations. It has been widely used in several countries, especially in the monitoring of HIV/AIDS and other sexually transmitted infections. Hard-to-reach…

Applications · Statistics 2012-06-26 Leonardo S. Bastos , Adriana A. Pinho , Claudia Codeço , Francisco I. Bastos
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