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In this paper, we introduce a novel semi-supervised learning framework tailored for medical image segmentation. Central to our approach is the innovative Multi-scale Text-aware ViT-CNN Fusion scheme. This scheme adeptly combines the…

Computer Vision and Pattern Recognition · Computer Science 2023-12-19 Yixing Lu , Zhaoxin Fan , Min Xu

We present a novel method for characterizing the microstructure of a material from volumetric datasets such as 3D image data from computed tomography (CT). The method is based on a new statistical model for the distribution of voxel…

Materials Science · Physics 2021-01-06 Elise Otterlei Brenne , Vedrana Andersen Dahl , Peter Stanley Jørgensen

Automated nodule segmentation is essential for computer-assisted diagnosis in ultrasound images. Nevertheless, most existing methods depend on precise pixel-level annotations by medical professionals, a process that is both costly and…

Computer Vision and Pattern Recognition · Computer Science 2024-07-19 Xingyue Zhao , Peiqi Li , Xiangde Luo , Meng Yang , Shi Chang , Zhongyu Li

Cryogenic electron microscopy (Cryo-EM) has become an essential tool for capturing high-resolution biological structures. Despite its advantage in visualizations, the large storage size of Cryo-EM data file poses significant challenges for…

Machine Learning · Computer Science 2025-12-16 Chunyu Zou

Electron Cryo-Tomography (ECT) enables 3D visualization of macromolecule structure inside single cells. Macromolecule classification approaches based on convolutional neural networks (CNN) were developed to separate millions of…

Quantitative Methods · Quantitative Biology 2018-03-28 Jialiang Guo , Bo Zhou , Xiangrui Zeng , Zachary Freyberg , Min Xu

Accurate segmentation of Optical Coherence Tomography (OCT) images is crucial for diagnosing and monitoring retinal diseases. However, the labor-intensive nature of pixel-level annotation limits the scalability of supervised learning for…

Computer Vision and Pattern Recognition · Computer Science 2025-12-30 Jiaqi Yang , Nitish Mehta , Xiaoling Hu , Chao Chen , Chia-Ling Tsai

Cryo-electron microscopy (cryo-EM) is capable of producing reconstructed 3D images of biomolecules at near-atomic resolution. As such, it represents one of the most promising imaging techniques in structural biology. However, raw cryo-EM…

Quantitative Methods · Quantitative Biology 2021-05-25 Nina Miolane , Frédéric Poitevin , Yee-Ting Li , Susan Holmes

Cryo-electron microscopy (cryo-EM) enables the atomic-resolution visualization of biomolecules; however, modern direct detectors generate data volumes that far exceed the available storage and transfer bandwidth, thereby constraining…

Image and Video Processing · Electrical Eng. & Systems 2026-03-31 Zain Shabeeb , Daniel Saeedi , Darin Tsui , Vida Jamali , Amirali Aghazadeh

It is generally accepted that one of the critical parts of current vision algorithms based on deep learning and convolutional neural networks is the annotation of a sufficient number of images to achieve competitive performance. This is…

Computer Vision and Pattern Recognition · Computer Science 2021-03-05 Kai Yao , Alberto Ortiz , Francisco Bonnin-Pascual

Accurate surgical phase recognition is crucial for computer-assisted interventions and surgical video analysis. Annotating long surgical videos is labor-intensive, driving research toward leveraging unlabeled data for strong performance…

We address the task of weakly-supervised few-shot image classification and segmentation, by leveraging a Vision Transformer (ViT) pretrained with self-supervision. Our proposed method takes token representations from the self-supervised ViT…

Computer Vision and Pattern Recognition · Computer Science 2023-07-10 Dahyun Kang , Piotr Koniusz , Minsu Cho , Naila Murray

Recent trends in semi-supervised learning have significantly boosted the performance of 3D semi-supervised medical image segmentation. Compared with 2D images, 3D medical volumes involve information from different directions, e.g.,…

Computer Vision and Pattern Recognition · Computer Science 2023-03-24 Heng Cai , Shumeng Li , Lei Qi , Qian Yu , Yinghuan Shi , Yang Gao

Serial sectioning Optical Coherence Tomography (sOCT) is a high-throughput, label free microscopic imaging technique that is becoming increasingly popular to study post-mortem neurovasculature. Quantitative analysis of the vasculature…

Image and Video Processing · Electrical Eng. & Systems 2024-05-24 Etienne Chollet , Yael Balbastre , Caroline Magnain , Bruce Fischl , Hui Wang

Robot-assisted catheterization has garnered a good attention for its potentials in treating cardiovascular diseases. However, advancing surgeon-robot collaboration still requires further research, particularly on task-specific automation.…

Computer Vision and Pattern Recognition · Computer Science 2025-04-15 Olatunji Mumini Omisore , Toluwanimi Akinyemi , Anh Nguyen , Lei Wang

Semantic segmentation of SAR images has garnered significant attention in remote sensing due to the immunity of SAR sensors to cloudy weather and light conditions. Nevertheless, SAR imagery lacks detailed information and is plagued by…

Computer Vision and Pattern Recognition · Computer Science 2025-04-21 Wang Liu , Zhiyu Wang , Xin Guo , Puhong Duan , Xudong Kang , Shutao Li

Cryo-electron microscopy (cryo-EM) is a powerful imaging technique for reconstructing three-dimensional molecular structures from noisy tomographic projection images of randomly oriented particles. We introduce a new data fusion framework,…

Computer Vision and Pattern Recognition · Computer Science 2025-12-15 Joe Kileel , Oscar Mickelin , Amit Singer , Sheng Xu

Deep-learning-based automated segmentation of vascular structures in preoperative CT scans contributes to computer-assisted diagnosis and intervention procedure in vascular diseases. While CT angiography (CTA) is the common standard,…

Image and Video Processing · Electrical Eng. & Systems 2024-10-31 Qixiang Ma , Antoine Łucas , Huazhong Shu , Adrien Kaladji , Pascal Haigron

Deep learning has been widely used in medical image segmentation and other aspects. However, the performance of existing medical image segmentation models has been limited by the challenge of obtaining sufficient high-quality labeled data…

Computer Vision and Pattern Recognition · Computer Science 2023-06-28 Zihan Li , Yunxiang Li , Qingde Li , Puyang Wang , Dazhou Guo , Le Lu , Dakai Jin , You Zhang , Qingqi Hong

Annotating lots of 3D medical images for training segmentation models is time-consuming. The goal of weakly supervised semantic segmentation is to train segmentation models without using any ground truth segmentation masks. Our work…

Image and Video Processing · Electrical Eng. & Systems 2024-04-23 Marius Schmidt-Mengin , Alexis Benichoux , Shibeshih Belachew , Nikos Komodakis , Nikos Paragios

This paper studies semi-supervised learning of semantic segmentation, which assumes that only a small portion of training images are labeled and the others remain unlabeled. The unlabeled images are usually assigned pseudo labels to be used…

Computer Vision and Pattern Recognition · Computer Science 2022-06-02 Donghyeon Kwon , Suha Kwak
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