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Regression on medical image sequences can capture temporal image pattern changes and predict images at missing or future time points. However, existing geodesic regression methods limit their regression performance by a strong underlying…

Computer Vision and Pattern Recognition · Computer Science 2024-07-19 Hao Bai , Yi Hong

We introduce second-order vector representations of words, induced from nearest neighborhood topological features in pre-trained contextual word embeddings. We then analyze the effects of using second-order embeddings as input features in…

Computation and Language · Computer Science 2017-05-25 Denis Newman-Griffis , Eric Fosler-Lussier

We consider the problem of Named Entity Recognition (NER) on biomedical scientific literature, and more specifically the genomic variants recognition in this work. Significant success has been achieved for NER on canonical tasks in recent…

Computation and Language · Computer Science 2020-06-16 Chaoran Cheng , Fei Tan , Zhi Wei

Named Entity Recognition (NER) encounters the challenge of unbalanced labels, where certain entity types are overrepresented while others are underrepresented in real-world datasets. This imbalance can lead to biased models that perform…

Computation and Language · Computer Science 2024-09-06 Abdul Rehman , Jian Jun Zhang , Xiaosong Yang

Named Entity Recognition (NER) is an important task in natural language processing that aims to identify and extract key entities from unstructured text. We present a novel application of NER in plasma physics research articles and address…

Computation and Language · Computer Science 2026-02-13 Muhammad Haris , Hans Höft , Markus M. Becker , Markus Stocker

We present a statistical model for German medical natural language processing trained for named entity recognition (NER) as an open, publicly available model. The work serves as a refined successor to our first GERNERMED model which is…

Computation and Language · Computer Science 2022-10-11 Johann Frei , Ludwig Frei-Stuber , Frank Kramer

Motivation: Named Entity Recognition (NER) is a key task to support biomedical research. In Biomedical Named Entity Recognition (BioNER), obtaining high-quality expert annotated data is laborious and expensive, leading to the development of…

Computation and Language · Computer Science 2023-05-23 Liangping Ding , Giovanni Colavizza , Zhixiong Zhang

Named entity recognition (NER) is widely used in natural language processing applications and downstream tasks. However, most NER tools target flat annotation from popular datasets, eschewing the semantic information available in nested…

Computation and Language · Computer Science 2019-06-05 Nicky Ringland , Xiang Dai , Ben Hachey , Sarvnaz Karimi , Cecile Paris , James R. Curran

We study the problem of training named entity recognition (NER) models using only distantly-labeled data, which can be automatically obtained by matching entity mentions in the raw text with entity types in a knowledge base. The biggest…

Computation and Language · Computer Science 2021-09-13 Yu Meng , Yunyi Zhang , Jiaxin Huang , Xuan Wang , Yu Zhang , Heng Ji , Jiawei Han

Lately, instruction-based techniques have made significant strides in improving performance in few-shot learning scenarios. They achieve this by bridging the gap between pre-trained language models and fine-tuning for specific downstream…

Information Retrieval · Computer Science 2024-01-25 Hiranmai Sri Adibhatla , Pavan Baswani , Manish Shrivastava

NER has been traditionally formulated as a sequence labeling task. However, there has been recent trend in posing NER as a machine reading comprehension task (Wang et al., 2020; Mengge et al., 2020), where entity name (or other information)…

Machine Learning · Computer Science 2022-05-13 Anubhav Shrimal , Avi Jain , Kartik Mehta , Promod Yenigalla

Named Entity Recognition (NER) and Relation Classification (RC) are important steps in extracting information from unstructured text and formatting it into a machine-readable format. We present a survey of recent deep learning models that…

Computation and Language · Computer Science 2024-03-28 Sakher Khalil Alqaaidi , Elika Bozorgi , Afsaneh Shams , Krzysztof Kochut

Named Entity Recognition (NER) frequently suffers from the problem of insufficient labeled data, particularly in fine-grained NER scenarios. Although $K$-shot learning techniques can be applied, their performance tends to saturate when the…

Computation and Language · Computer Science 2023-11-14 Su Ah Lee , Seokjin Oh , Woohwan Jung

Understanding and quantifying node importance is a fundamental problem in network science and engineering, underpinning a wide range of applications such as influence maximization, social recommendation, and network dismantling. Prior…

Social and Information Networks · Computer Science 2026-02-17 Jiahui Gao , Kuang Zhou , Yuchen Zhu , Keyu Wu

In this paper, we present our approach to extracting structured information from unstructured Electronic Health Records (EHR) [2] which can be used to, for example, study adverse drug reactions in patients due to chemicals in their…

Computation and Language · Computer Science 2020-01-30 Amogh Kamat Tarcar , Aashis Tiwari , Vineet Naique Dhaimodker , Penjo Rebelo , Rahul Desai , Dattaraj Rao

Model compression has gained significant popularity as a means to alleviate the computational and memory demands of machine learning models. Each compression technique leverages unique features to reduce the size of neural networks.…

Machine Learning · Computer Science 2024-08-20 Yingtao Shen , Minqing Sun , Jianzhe Lin , Jie Zhao , An Zou

Named entity recognition (NER) models generally perform poorly when large training datasets are unavailable for low-resource domains. Recently, pre-training a large-scale language model has become a promising direction for coping with the…

Computation and Language · Computer Science 2021-12-02 Zihan Liu , Feijun Jiang , Yuxiang Hu , Chen Shi , Pascale Fung

While neural network-based models have achieved impressive performance on a large body of NLP tasks, the generalization behavior of different models remains poorly understood: Does this excellent performance imply a perfect generalization…

Computation and Language · Computer Science 2020-01-14 Jinlan Fu , Pengfei Liu , Qi Zhang , Xuanjing Huang

While many production-ready and robust algorithms are available for the task of recommendation systems, many of these systems do not take the order of user's consumption into account. The order of consumption can be very useful and matters…

Information Retrieval · Computer Science 2022-05-03 Mehdi Soleiman Nejad , Meysam Varasteh , Hadi Moradi , Mohammad Amin Sadeghi

Medical named entity recognition (NER) has wide applications in intelligent healthcare. Sufficient labeled data is critical for training accurate medical NER model. However, the labeled data in a single medical platform is usually limited.…

Computation and Language · Computer Science 2020-03-26 Suyu Ge , Fangzhao Wu , Chuhan Wu , Tao Qi , Yongfeng Huang , Xing Xie