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Research on overlapped and discontinuous named entity recognition (NER) has received increasing attention. The majority of previous work focuses on either overlapped or discontinuous entities. In this paper, we propose a novel span-based…

Computation and Language · Computer Science 2021-06-29 Fei Li , Zhichao Lin , Meishan Zhang , Donghong Ji

Named-entity recognition (NER) detects texts with predefined semantic labels and is an essential building block for natural language processing (NLP). Notably, recent NER research focuses on utilizing massive extra data, including…

Computation and Language · Computer Science 2023-05-09 Yuxiang Zhang , Junjie Wang , Xinyu Zhu , Tetsuya Sakai , Hayato Yamana

Spoken Named Entity Recognition (NER) aims to extract named entities from speech and categorise them into types like person, location, organization, etc. In this work, we present VietMed-NER - the first spoken NER dataset in the medical…

Audio and Speech Processing · Electrical Eng. & Systems 2025-04-03 Khai Le-Duc , David Thulke , Hung-Phong Tran , Long Vo-Dang , Khai-Nguyen Nguyen , Truong-Son Hy , Ralf Schlüter

Deep neural models for named entity recognition (NER) have shown impressive results in overcoming label scarcity and generalizing to unseen entities by leveraging distant supervision and auxiliary information such as explanations. However,…

Hierarchical knowledge structures are ubiquitous across real-world domains and play a vital role in organizing information from coarse to fine semantic levels. While such structures have been widely used in taxonomy systems, biomedical…

Machine Learning · Computer Science 2026-03-10 Yunhui Liu , Yongchao Liu , Yinfeng Chen , Chuntao Hong , Tao Zheng , Tieke He

Named Entity Recognition (NER) and Relation Extraction (RE) are essential tools in distilling knowledge from biomedical literature. This paper presents our findings from participating in BioNLP Shared Tasks 2019. We addressed Named Entity…

Computation and Language · Computer Science 2019-10-09 Usama Yaseen , Pankaj Gupta , Hinrich Schütze

To achieve state-of-the-art performance, one still needs to train NER models on large-scale, high-quality annotated data, an asset that is both costly and time-intensive to accumulate. In contrast, real-world applications often resort to…

Computation and Language · Computer Science 2023-10-26 Zhendong Chu , Ruiyi Zhang , Tong Yu , Rajiv Jain , Vlad I Morariu , Jiuxiang Gu , Ani Nenkova

Nested Effects Models (NEMs) are a class of graphical models introduced to analyze the results of gene perturbation screens. NEMs explore noisy subset relations between the high-dimensional outputs of phenotyping studies, e.g. the effects…

Quantitative Methods · Quantitative Biology 2010-10-08 Achim Tresch , Florian Markowetz

The objective of this paper is to design novel multi-layer neural network architectures for multiscale simulations of flows taking into account the observed data and physical modeling concepts. Our approaches use deep learning concepts…

Numerical Analysis · Mathematics 2018-06-14 Yating Wang , Siu Wun Cheung , Eric T. Chung , Yalchin Efendiev , Min Wang

Predicting unobserved entries of a partially observed matrix has found wide applicability in several areas, such as recommender systems, computational biology, and computer vision. Many scalable methods with rigorous theoretical guarantees…

Machine Learning · Statistics 2018-02-15 Vatsal Shah , Nikhil Rao , Weicong Ding

This paper investigates the impact of shallow versus deep relevance judgments on the performance of BERT-based reranking models in neural Information Retrieval. Shallow-judged datasets, characterized by numerous queries each with few…

Information Retrieval · Computer Science 2025-07-01 Gabriel Iturra-Bocaz , Danny Vo , Petra Galuscakova

This paper presents a method of designing specific high-order dependency factor on the linear chain conditional random fields (CRFs) for named entity recognition (NER). Named entities tend to be separated from each other by multiple outside…

Computation and Language · Computer Science 2018-05-29 Wangjin Lee , Jinwook Choi

For languages with no annotated resources, transferring knowledge from rich-resource languages is an effective solution for named entity recognition (NER). While all existing methods directly transfer from source-learned model to a target…

Computation and Language · Computer Science 2020-07-16 Qianhui Wu , Zijia Lin , Guoxin Wang , Hui Chen , Börje F. Karlsson , Biqing Huang , Chin-Yew Lin

The state-of-the-art named entity recognition (NER) systems are statistical machine learning models that have strong generalization capability (i.e., can recognize unseen entities that do not appear in training data) based on lexical and…

Computation and Language · Computer Science 2019-11-04 Jian Ni , Radu Florian

We propose a notation for tensors with named axes, which relieves the author, reader, and future implementers of machine learning models from the burden of keeping track of the order of axes and the purpose of each. The notation makes it…

Machine Learning · Computer Science 2023-01-19 David Chiang , Alexander M. Rush , Boaz Barak

Despite their success and widespread adoption, the opaque nature of deep neural networks (DNNs) continues to hinder trust, especially in critical applications. Current interpretability solutions often yield inconsistent or oversimplified…

Machine Learning · Computer Science 2024-10-10 Alec F. Diallo , Vaishak Belle , Paul Patras

In this study, we aim to reduce generation latency for Named Entity Recognition (NER) with Large Language Models (LLMs). The main cause of high latency in LLMs is the sequential decoding process, which autoregressively generates all labels…

Computation and Language · Computer Science 2024-11-22 Jinghui Lu , Ziwei Yang , Yanjie Wang , Xuejing Liu , Brian Mac Namee , Can Huang

Supervised models trained to predict properties from representations have been achieving high accuracy on a variety of tasks. For instance, the BERT family seems to work exceptionally well on the downstream task from NER tagging to the…

Computation and Language · Computer Science 2020-12-22 Tejas Vaidhya , Ayush Kaushal

Named Entity Recognition (NER) serves as a foundational component in many natural language processing (NLP) pipelines. However, current NER models typically output a single predicted label sequence without any accompanying measure of…

Computation and Language · Computer Science 2026-01-27 Matthew Singer , Srijan Sengupta , Karl Pazdernik

We study a ranking and selection problem of learning from choice-based feedback with dynamic assortments. In this problem, a company sequentially displays a set of items to a population of customers and collects their choices as feedback.…

Machine Learning · Computer Science 2025-01-03 Junwen Yang , Yifan Feng
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