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Identifying and understanding the large-scale biodiversity patterns in time and space is vital for conservation and addressing fundamental ecological and evolutionary questions. Network-based methods have proven useful for simplifying and…

Populations and Evolution · Quantitative Biology 2023-07-03 Daniel Edler , Anton Holmgren , Alexis Rojas , Joaquín Calatayud , Martin Rosvall , Alexandre Antonelli

Many real-world datasets -- from an artist's body of work to a person's social media history -- exhibit meaningful semantic changes over time that are difficult to capture with existing dimensionality reduction methods. To address this gap,…

Human-Computer Interaction · Computer Science 2025-09-03 Matte Lim , Catherine Yeh , Martin Wattenberg , Fernanda Viégas , Panagiotis Michalatos

Museums, libraries, and other cultural institutions continue to prioritize and build web-based visualization systems that increase access and discovery to digitized archives. Prominent examples exist that illustrate impressive…

Human-Computer Interaction · Computer Science 2020-09-07 Taylor Arnold , Nathaniel Ayers , Justin Madron , Robert Nelson , Lauren Tilton

The continuous growth of scientific literature brings innovations and, at the same time, raises new challenges. One of them is related to the fact that its analysis has become difficult due to the high volume of published papers for which…

Computation and Language · Computer Science 2020-11-06 Danilo Dessì , Francesco Osborne , Diego Reforgiato Recupero , Davide Buscaldi , Enrico Motta

Large-scale human social network structure is typically inferred from digital trace samples of online social media platforms or mobile communication data. Instead, here we investigate the social network structure of a complete population,…

Physics and Society · Physics 2022-11-29 Eszter Bokányi , Eelke M. Heemskerk , Frank W. Takes

Role discovery is the task of dividing the set of nodes on a graph into classes of structurally similar roles. Modern strategies for role discovery typically rely on graph embedding techniques, which are capable of recognising complex local…

Social and Information Networks · Computer Science 2022-06-08 Eoghan Cunningham , Derek Greene

Recent advancements in large language models have significantly improved their context windows, yet challenges in effective long-term memory management remain. We introduce MemTree, an algorithm that leverages a dynamic, tree-structured…

Computation and Language · Computer Science 2025-03-21 Alireza Rezazadeh , Zichao Li , Wei Wei , Yujia Bao

Complex systems are characterized by many interacting units that give rise to emergent behavior. A particularly advantageous way to study these systems is through the analysis of the networks that encode the interactions among the system's…

Physics and Society · Physics 2019-03-21 Alberto Aleta , Yamir Moreno

While the Earth observation community has witnessed a surge in high-impact foundation models and global Earth embedding datasets, a significant barrier remains in translating these academic assets into freely accessible tools. This tutorial…

Computer Vision and Pattern Recognition · Computer Science 2026-04-09 Yijie Zheng , Weijie Wu , Bingyue Wu , Long Zhao , Guoqing Li , Mikolaj Czerkawski , Konstantin Klemmer

Our interest is in multiplex network data with multiple network samples observed across the same set of nodes. Examples originate from a variety of fields, including brain connectivity, international trade networks, and social networks,…

Methodology · Statistics 2026-04-21 Yuren Zhou , Yuqi Gu , David B. Dunson

Any large complex data analysis to infer or discover meaningful information/knowledge involves the following steps (in addition to data collection, cleaning, preparing the data for analysis such as attribute elimination): i) Modeling the…

Social and Information Networks · Computer Science 2021-05-25 Abhishek Santra , Kanthi Komar , Sanjukta Bhowmick , Sharma Chakravarthy

Immersive visualization of network data enables users to physically navigate and interact with complex structures, but managing transitions between detailed local (egocentric) views and global (exocentric) overviews remains a major…

Graphics · Computer Science 2025-07-03 Eric Zimmermann , Stefan Bruckner

The large-scale structure of the universe is comprised of virialized blob-like clusters, linear filaments, sheet-like walls and huge near empty three-dimensional voids. Characterizing the large scale universe is essential to our…

Cosmology and Nongalactic Astrophysics · Physics 2024-06-06 Nithin Shivshankar , Pratyush Pranav , Vijay Natarajan , Rien van de Weygaert , E G Patrick Bos , Steven Rieder

In the present work we have selected a collection of statistical and mathematical tools useful for the exploration of multivariate data and we present them in a form that is meant to be particularly accessible to a classically trained…

Statistics Theory · Mathematics 2010-09-01 Magnus Fontes

We study the problem of visualizing phylogenetic networks, which are extensions of the Tree of Life in biology. We use a space filling visualization method, called DAGmaps, in order to obtain clear visualizations using limited space. In…

Data Structures and Algorithms · Computer Science 2016-09-06 Ioannis G. Tollis , Konstantinos G. Kakoulis

Explorative flow visualization allows domain experts to analyze complex flow structures by interactively investigating flow patterns. However, traditional visual interfaces often rely on specialized graphical representations and…

Human-Computer Interaction · Computer Science 2025-08-11 Weihan Zhang , Jun Tao

A creative idea is often born from transforming, combining, and modifying ideas from existing visual examples capturing various concepts. However, one cannot simply copy the concept as a whole, and inspiration is achieved by examining…

Computer Vision and Pattern Recognition · Computer Science 2023-06-01 Yael Vinker , Andrey Voynov , Daniel Cohen-Or , Ariel Shamir

The exponential growth of scientific literature requires effective management and extraction of valuable insights. While existing scientific search engines excel at delivering search results based on relational databases, they often neglect…

Phylogenetics begins with reconstructing biological family trees from genetic data. Since Nature is not limited to tree-like histories, we use networks to organize our data, and have discovered new polytopes, metric spaces, and simplicial…

Combinatorics · Mathematics 2019-05-28 Satyan Devadoss , Cassandra Durell , Stefan Forcey

Tracing the evolution of specific topics is a subject area which belongs to the general problem of mapping the structure of scientific knowledge. Often bibliometric data bases are used to study the history of scientific topic evolution from…

Digital Libraries · Computer Science 2020-03-24 Olesya Mryglod , Bertrand Berche , Yurij Holovatch , Ralph Kenna
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