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Single-cell RNA-seq provides detailed molecular snapshots of individual cells but is notoriously noisy. Variability stems from biological differences and technical factors, such as amplification bias and limited RNA capture efficiency,…

Machine Learning · Computer Science 2026-02-27 Victor Chardès

This paper considers the problem of estimating a low-rank matrix from the observation of all or a subset of its entries in the presence of Poisson noise. When we observe all entries, this is a problem of matrix denoising; when we observe…

Machine Learning · Statistics 2024-04-22 Andrew D. McRae , Mark A. Davenport

We study the statistical decision process of detecting the low-rank signal from various signal-plus-noise type data matrices, known as the spiked random matrix models. We first show that the principal component analysis can be improved by…

Statistics Theory · Mathematics 2023-01-18 Ji Hyung Jung , Hye Won Chung , Ji Oon Lee

We study the high-dimensional inference of a rank-one signal corrupted by sparse noise. The noise is modelled as the adjacency matrix of a weighted undirected graph with finite average connectivity in the large size limit. Using the replica…

Machine Learning · Statistics 2025-11-18 Urte Adomaityte , Gabriele Sicuro , Pierpaolo Vivo

Many applications, including rank aggregation, crowd-labeling, and graphon estimation, can be modeled in terms of a bivariate isotonic matrix with unknown permutations acting on its rows and/or columns. We consider the problem of estimating…

Machine Learning · Statistics 2019-10-29 Cheng Mao , Ashwin Pananjady , Martin J. Wainwright

In this letter, we study the deterministic sampling patterns for the completion of low rank matrix, when corrupted with a sparse noise, also known as robust matrix completion. We extend the recent results on the deterministic sampling…

Information Theory · Computer Science 2018-03-14 Morteza Ashraphijuo , Vaneet Aggarwal , Xiaodong Wang

We study the problem of estimating a large, low-rank matrix corrupted by additive noise of unknown covariance, assuming one has access to additional side information in the form of noise-only measurements. We study the Whiten-Shrink-reColor…

Statistics Theory · Mathematics 2023-07-18 Matan Gavish , William Leeb , Elad Romanov

Matrix completion focuses on recovering missing or incomplete information in matrices. This problem arises in various applications, including image processing and network analysis. Previous research proposed Poisson matrix completion for…

Machine Learning · Computer Science 2024-08-30 Yu Lu , Kevin Bui , Roummel F. Marcia

Reduced-rank regression recognises the possibility of a rank-deficient matrix of coefficients. We propose a novel Bayesian model for estimating the rank of the coefficient matrix, which obviates the need for post-processing steps and allows…

Methodology · Statistics 2024-02-14 Maria F. Pintado , Matteo Iacopini , Luca Rossini , Alexander Y. Shestopaloff

Matrices with low-rank structure are ubiquitous in scientific computing. Choosing an appropriate rank is a key step in many computational algorithms that exploit low-rank structure. However, estimating the rank has been done largely in an…

Numerical Analysis · Mathematics 2024-01-08 Maike Meier , Yuji Nakatsukasa

We extend the theory of low-rank matrix recovery and completion to the case when Poisson observations for a linear combination or a subset of the entries of a matrix are available, which arises in various applications with count data. We…

Machine Learning · Computer Science 2016-04-20 Yang Cao , Yao Xie

Many statistical studies are concerned with the analysis of observations organized in a matrix form whose elements are count data. When these observations are assumed to follow a Poisson or a multinomial distribution, it is of interest to…

Statistics Theory · Mathematics 2022-01-04 Jérémie Bigot , Charles Deledalle

We develop a dimension reduction framework for data consisting of matrices of counts. Our model is based on assuming the existence of a small amount of independent normal latent variables that drive the dependency structure of the observed…

Statistics Theory · Mathematics 2021-10-28 Joni Virta , Andreas Artemiou

We consider the problem of estimating the covariance matrix of a random signal observed through unknown translations (modeled by cyclic shifts) and corrupted by noise. Solving this problem allows to discover low-rank structures masked by…

Statistics Theory · Mathematics 2020-11-11 Boris Landa , Yoel Shkolnisky

We propose a novel statistical inference methodology for multiway count data that is corrupted by false zeros that are indistinguishable from true zero counts. Our approach consists of zero-truncating the Poisson distribution to neglect all…

Methodology · Statistics 2025-09-10 Oscar López , Daniel M. Dunlavy , Richard B. Lehoucq

Rank estimation is a classical model order selection problem that arises in a variety of important statistical signal and array processing systems, yet is addressed relatively infrequently in the extant literature. Here we present sample…

Methodology · Statistics 2011-08-25 Patrick O. Perry , Patrick J. Wolfe

We propose a novel automatic parameter selection strategy for variational imaging problems under Poisson noise corruption. The selection of a suitable regularization parameter, whose value is crucial in order to achieve high quality…

Numerical Analysis · Mathematics 2022-07-22 Francesca Bevilacqua , Alessandro Lanza , Monica Pragliola , Fiorella Sgallari

We consider the multivariate response regression problem with a regression coefficient matrix of low, unknown rank. In this setting, we analyze a new criterion for selecting the optimal reduced rank. This criterion differs notably from the…

Methodology · Statistics 2018-10-30 Xin Bing , Marten Wegkamp

We consider a ranking problem where we have noisy observations from a matrix with isotonic columns whose rows have been permuted by some permutation $\pi$ *. This encompasses many models, including crowd-labeling and ranking in tournaments…

Statistics Theory · Mathematics 2023-10-03 Emmanuel Pilliat , Alexandra Carpentier , Nicolas Verzelen

Recently, fundamental conditions on the sampling patterns have been obtained for finite completability of low-rank matrices or tensors given the corresponding ranks. In this paper, we consider the scenario where the rank is not given and we…

Machine Learning · Computer Science 2017-11-03 Morteza Ashraphijuo , Xiaodong Wang , Vaneet Aggarwal
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