English

Poisson PCA for matrix count data

Statistics Theory 2021-10-28 v1 Statistics Theory

Abstract

We develop a dimension reduction framework for data consisting of matrices of counts. Our model is based on assuming the existence of a small amount of independent normal latent variables that drive the dependency structure of the observed data, and can be seen as the exact discrete analogue for a contaminated low-rank matrix normal model. We derive estimators for the model parameters and establish their root-nn consistency. An extension of a recent proposal from the literature is used to estimate the latent dimension of the model. Additionally, a sparsity-accommodating variant of the model is considered. The method is shown to surpass both its vectorization-based competitors and matrix methods assuming the continuity of the data distribution in analysing simulated data and real abundance data.

Keywords

Cite

@article{arxiv.2110.14420,
  title  = {Poisson PCA for matrix count data},
  author = {Joni Virta and Andreas Artemiou},
  journal= {arXiv preprint arXiv:2110.14420},
  year   = {2021}
}

Comments

19 pages, 7 figures

R2 v1 2026-06-24T07:14:00.373Z