English
Related papers

Related papers: Sequence of Events During Peptide Unbinding from R…

200 papers

The antimony-based chalcogenide Sb2Se3 is a rapidly emerging material for photonic phase change applications owing to its ultra-low optical losses at telecommunication wavelengths in both crystalline and amorphous phases. Here, we…

Optics · Physics 2022-05-25 Daniel Lawson , Daniel W. Hewak , Otto L. Muskens , Ioannis Zeimpekis

RNA duplex stability depends strongly on ionic conditions, and inside cells RNAs are exposed to both monovalent and multivalent ions. Despite recent advances, we do not have general methods to quantitatively account for the effects of…

Biomolecules · Quantitative Biology 2013-07-02 C. V. Bizarro , A. Alemany , F. Ritort

Rebinding of dissociated ligands from cell surface proteins can confound quantitative measurements of dissociation rates important for characterizing the affinity of binding interactions. This can be true also for in vitro techniques such…

Quantitative Methods · Quantitative Biology 2007-05-23 Manoj Gopalakrishnan , Kimberly Forsten-Williams , Theressa R. Cassino , Luz Padro , Thomas E. Ryan , Uwe C. Tauber

Photoirradiation of silver nanoparticles in water solution of NaNO3 (0.01M) and in dissolved DNA was investigated by spectrophotometric and thermodynamic kinetic approaches. It is shown that only the irradiated complexes AgNPs-DNA have…

Biological Physics · Physics 2012-06-22 Vasil G. Bregadze , Zaza G. Melikishvili , Tamar G. Giorgadze

Using coarse-grained model we have explored forced-unfolding of RNA hairpin as a function of $f_S$ and the loading rate ($r_f$). The simulations and theoretical analysis have been done without and with the handles that are explicitly…

Biomolecules · Quantitative Biology 2009-11-13 Changbong Hyeon , D. Thirumalai

Protein phosphorylation provides a dynamic readout of cellular signaling yet remains difficult to detect at low abundance and stoichiometry. Single-molecule surface-enhanced Raman spectroscopy (SM-SERS) using particle-in-pore plasmonic…

Mesoscale and Nanoscale Physics · Physics 2026-04-09 Mulusew W. Yaltaye , Yingqi Zhao , Kuo Zhan , Vahid Farrahi , Jian-An Huang

The structure of the unbound proton-rich isotope 19Na was studied in resonance elastic scattering of a radioactive 18Ne beam on a proton target using the thick-target inverse-kinematics method. The experiment covered excitation energy range…

Nuclear Experiment · Physics 2008-11-26 B. B. Skorodumov , G. V. Rogachev , P. Boutachkov , A. Aprahamian , J. J. Kolata , L. O. Lamm , M. Quinn , A. Woehr

Abridged - Stars with ZAMS masses between 140 and $260 M_\odot$ are thought to explode as pair-instability supernovae (PISNe). During their thermonuclear runaway, PISNe can produce up to several tens of solar masses of radioactive nickel,…

The electromagnetic transient following a binary neutron star merger is known as a kilonova (KN). Owing to rapid expansion velocities and small ejecta masses, KNe rapidly transition into the Non-Local Thermodynamic Equilibrium (NLTE)…

High Energy Astrophysical Phenomena · Physics 2023-10-17 Quentin Pognan , Jon Grumer , Anders Jerkstrand , Shinya Wanajo

There is growing interest in using ultrafast light pulses to drive functional materials into nonequilibrium states with novel properties. The conventional wisdom is that above gap photoexcitation behaves similarly to raising the electronic…

We systematically investigate temperature- and spectrally-dependent optical reflectivity dynamics in AAs$_{2}$Fe$_{2}$, (A=Ba, Sr and Eu), iron-based superconductors parent spin-density-wave (SDW) compounds. Two different relaxation…

Superconductivity · Physics 2014-04-28 A. Pogrebna , N. Vujičić , T. Mertelj , G. Cao , Z. A. Xu , J. -H. Chu , I. R. Fisher , D. Mihailovic

We investigated the chemical pressure effects on structural and electronic properties of SnTe-based material using partial substitution of Sn by Ag0.5Bi0.5, which results in lattice shrinkage. For Sn1-2x(AgBi)xTe, single-phase…

Recently it has been shown that pairs of atoms can form metastable bonds due to non-conservative forces induced by dissipation [Lemeshko&Weimer, Nature Comm. 4, 2230 (2013)]. Here we study the dynamics of interaction-induced coherent…

Atomic Physics · Physics 2013-10-09 Mikhail Lemeshko

Reconstructing hyperspectral images (HSIs) from a single RGB image is ill-posed and can become physically inconsistent when the camera spectral sensitivity (CSS) and scene illumination are misspecified. We formulate RGB-to-HSI…

Computer Vision and Pattern Recognition · Computer Science 2025-09-22 Xiaoyang Ma , Yiyang Chai , Xinran Qu , Hong Sun

A swift chemical route to synthesize Co-doped SnO$_2$ nanopowders is described. Pure and highly stable Sn$_{1-x}$Co$_x$O$_{2-\delta}$ (0 $\le$ x $\le$ 0.15) crystalline nanoparticles were synthesized, with mean grain sizes < 5 nm and the…

Materials Science · Physics 2015-03-31 T. Entradas , J. Cabrita , S. Dalui , M. R. Nunes , O. C. Monteiro , A. J. Silvestre

We study the unzipping of double stranded DNA (dsDNA) by applying a pulling force at a fraction $s$ $(0 \le s \le 1)$ from the anchored end. From exact analytical and numerical results, the complete phase diagram is presented. The phase…

Soft Condensed Matter · Physics 2009-11-10 Rajeev Kapri , Somendra M. Bhattacharjee , Flavio Seno

Bayesian Estimation Applied to Multiple Species (BEAMS) is implemented in the BEAMS with Bias Corrections (BBC) framework to produce a redshift-binned Hubble diagram (HD) for Type Ia supernovae (SNe Ia). BBC corrects for selection effects…

Cosmology and Nongalactic Astrophysics · Physics 2023-07-26 Richard Kessler , Maria Vincenzi , Patrick Armstrong

We studied electronic relaxation in long diffusive superconductor / normal metal / superconductor (S/N/S) junctions by means of current noise and transport measurements down to very low temperature (100mK). Samples with normal metal lengths…

Mesoscale and Nanoscale Physics · Physics 2007-05-23 C. Hoffmann , F. Lefloch , M. Sanquer

We study in detail coherent phase control of femtosecond resonance-mediated (2+1) three-photon absorption and its dependence on the spectral bandwidth of the excitation pulse. The regime is the weak-field regime of third perturbative order.…

Atomic Physics · Physics 2007-11-28 Andrey Gandman , Lev Chuntonov , Leonid Rybak , Zohar Amitay

Phage display is a powerful laboratory technique used to study the interactions between proteins and other molecules, whether other proteins, peptides, DNA or RNA. The under-utilisation of this data in conjunction with deep learning models…

Populations and Evolution · Quantitative Biology 2026-01-08 Ilann Amiaud-Plachy , Michael Blank , Oliver Bent , Sebastien Boyer