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Background: Spatial transcriptomics have emerged as a powerful tool in biomedical research because of its ability to capture both the spatial contexts and abundance of the complete RNA transcript profile in organs of interest. However,…

Genomics · Quantitative Biology 2025-04-18 Shuo Shuo Liu , Shikun Wang , Yuxuan Chen , Anil K. Rustgi , Ming Yuan , Jianhua Hu

Attenuation of ultrasound waves varies with tissue composition, hence its estimation offers great potential for tissue characterization and diagnosis and staging of pathology. We recently proposed a method that allows to spatially…

Medical Physics · Physics 2020-10-13 Richard Rau , Ozan Unal , Dieter Schweizer , Valery Vishnevskiy , Orcun Goksel

Simulation-based ultrasound training can be an essential educational tool. Realistic ultrasound image appearance with typical speckle texture can be modeled as convolution of a point spread function with point scatterers representing tissue…

Computer Vision and Pattern Recognition · Computer Science 2020-06-19 Lin Zhang , Valery Vishnevskiy , Orcun Goksel

Optoacoustic image formation is conventionally based upon ultrasound time-of-flight readings from multiple detection positions. Herein, we exploit acoustic scattering to physically encode the position of optical absorbers in the acquired…

Biological Physics · Physics 2019-10-30 Xose Luis Dean-Ben , Ali Ozbek , Hernan Lopez-Schier , Daniel Razansky

We propose a novel solution for volumetric ultrasound imaging using single-side access 3-D synthetic-aperture scanning of a clinical linear array. This solution is based on an advanced scanning geometry and a software-based ultrasound…

Medical Physics · Physics 2021-01-27 Théotim Lucas , Isabelle Quidu , S. Lori Bridal , Jerome Gateau

Motion during image acquisition can cause image degradation in all medical imaging modalities. This is particularly relevant in 2-D ultrasound imaging, since out-of-plane motion can only be compensated for movements smaller than elevational…

Medical Physics · Physics 2019-02-07 S. Harput , K. Christensen-Jeffries , J. Brown , J. Zhu , G. Zhang , R. J. Eckersley , C. Dunsby , M-X. Tang

For beamforming ultrasound (US) signals, typically a spatially constant speed-of-sound (SoS) is assumed to calculate delays. As SoS in tissue may vary relatively largely, this approximation may cause wavefront aberrations, thus degrading…

Image and Video Processing · Electrical Eng. & Systems 2019-12-12 Richard Rau , Dieter Schweizer , Valery Vishnevskiy , Orcun Goksel

Wireless and wearable ultrasound devices promise to enable continuous ultrasound monitoring, but power consumption and data throughput remain critical challenges. Reducing the number of transmit events per second directly impacts both. We…

Image and Video Processing · Electrical Eng. & Systems 2026-01-29 Oisín Nolan , Wessel L. van Nierop , Louis D. van Harten , Tristan S. W. Stevens , Ruud J. G. van Sloun

Ultrasound simulation based on ray tracing enables the synthesis of highly realistic images. It can provide an interactive environment for training sonographers as an educational tool. However, due to high computational demand, there is a…

Computer Vision and Pattern Recognition · Computer Science 2020-06-22 Lin Zhang , Tiziano Portenier , Christoph Paulus , Orcun Goksel

Ultrasound attenuation is caused by absorption and scattering in tissue and is thus a function of tissue composition, hence its imaging offers great potential for screening and differential diagnosis. In this paper we propose a novel method…

Signal Processing · Electrical Eng. & Systems 2019-10-15 Richard Rau , Ozan Unal , Dieter Schweizer , Valery Vishnevskiy , Orcun Goksel

Super-Resolution Ultrasound (SRUS) imaging through localising and tracking microbubbles, also known as Ultrasound Localisation Microscopy (ULM), has demonstrated significant potential for reconstructing microvasculature and flows with…

Image and Video Processing · Electrical Eng. & Systems 2025-03-26 Jipeng Yan , Qingyuan Tan , Shusei Kawara , Jingwen Zhu , Bingxue Wang , Matthieu Toulemonde , Honghai Liu , Ying Tan , Meng-Xing Tang

This paper presents an adaptive and intelligent sparse model for digital image sampling and recovery. In the proposed sampler, we adaptively determine the number of required samples for retrieving image based on space-frequency-gradient…

Computer Vision and Pattern Recognition · Computer Science 2017-11-27 Ali Taimori , Farokh Marvasti

Ultrasound is widely used in medical diagnostics allowing for accessible and powerful imaging but suffers from resolution limitations due to diffraction and the finite aperture of the imaging system, which restricts diagnostic use. The…

Computer Vision and Pattern Recognition · Computer Science 2024-08-08 Felix Duelmer , Walter Simson , Mohammad Farid Azampour , Magdalena Wysocki , Angelos Karlas , Nassir Navab

Emerging sonography techniques often require increasing the number of transducer elements involved in the imaging process. Consequently, larger amounts of data must be acquired and processed. The significant growth in the amounts of data…

Information Theory · Computer Science 2015-06-04 Noam Wagner , Yonina C. Eldar , Zvi Friedman

The parametric optimization for the ultrasound computed tomography system is introduced. It is hypothesized that the pulse characteristic directly affects the information present in the reconstructed profile. The ultrasound excitation modes…

Medical Physics · Physics 2024-08-13 Ankur Kumar , Mayank Goswami

Millimeter-accuracy Ultra-Wideband (UWB) positioning systems using the Time Difference Of Arrival (TDOA) algorithm are able to be utilized in military and many other important applications. Previous research on UWB positioning system has…

Information Theory · Computer Science 2013-07-30 Sheng Jiang , Matthew Trinkle , Hongyuan Wang

This compendium review focuses on the spatial distribution of sensitivity to localized absorption changes in optically diffuse media, particularly for measurements relevant to near-infrared spectroscopy. The three temporal domains,…

Instrumentation and Detectors · Physics 2024-03-01 Giles Blaney , Angelo Sassaroli , Sergio Fantini

In speech production research, different imaging modalities have been employed to obtain accurate information about the movement and shaping of the vocal tract. Ultrasound is an affordable and non-invasive imaging modality with relatively…

Audio and Speech Processing · Electrical Eng. & Systems 2020-08-07 Tamás Gábor Csapó , Kele Xu

Matrix imaging paves the way towards a next revolution in wave physics. Based on the response matrix recorded between a set of sensors, it enables an optimized compensation of aberration phenomena and multiple scattering events that usually…

Image and Video Processing · Electrical Eng. & Systems 2023-11-03 Flavien Bureau , Justine Robin , Arthur Le Ber , William Lambert , Mathias Fink , Alexandre Aubry

Ultrasound imaging is a cost-effective and radiation-free modality for visualizing anatomical structures in real-time, making it ideal for guiding surgical interventions. However, its limited field-of-view, speckle noise, and imaging…

Image and Video Processing · Electrical Eng. & Systems 2024-04-26 Remi Delaunay , Ruisi Zhang , Filipe C. Pedrosa , Navid Feizi , Dianne Sacco , Rajni Patel , Jayender Jagadeesan