Related papers: Notebook articles: towards a transformative publis…
Executable scientific papers contain not just layouted text for reading. They contain, or link to, machine-comprehensible representations of the scientific findings or experiments they describe. Client-side players can thus enable readers…
Scientific journals are the repositories of the gradually accumulating knowledge of mankind about the world surrounding us. Just as our knowledge is organised into classes ranging from major disciplines, subjects and fields to increasingly…
Data science workflows are human-centered processes involving on-demand programming and analysis. While programmable and interactive interfaces such as widgets embedded within computational notebooks are suitable for these workflows, they…
From the dawn of civilization, people have used folktales and stories to share information and knowledge. After the invention of printing in the 15th century, technology provided helpful yet complicated utilities to exchange ideas. In the…
In the past decade, open science and science of science communities have initiated innovative efforts to address concerns about the reproducibility and replicability of published scientific research. In some respects, these efforts have…
The number of researchers, articles, journals, conferences, funding opportunities, and other such scholarly resources continues to grow every year and at an increasing rate. Many services have emerged to support scholars in navigating…
Computational methods have reshaped the landscape of modern biology. While the biomedical community is increasingly dependent on computational tools, the mechanisms ensuring open data, open software, and reproducibility are variably…
Making available and archiving scientific results is for the most part still considered the task of classical publishing companies, despite the fact that classical forms of publishing centered around printed narrative articles no longer…
Academic, peer-reviewed short papers are a common way to present a late-breaking work to the academic community that outlines preliminary findings, research ideas, and novel conversations. By comparison, blogging or writing posts on social…
Readability is on the cusp of a revolution. Fixed text is becoming fluid as a proliferation of digital reading devices rewrite what a document can do. As past constraints make way for more flexible opportunities, there is great need to…
Research software is an integral part of most research today and it is widely accepted that research software artifacts should be accessible and reproducible. However, the sustainable archival of research software artifacts is an ongoing…
Nations, universities, and regional governments commit resources to promote the dissemination of scientific and technical knowledge. One focuses on knowledge-based innovations and the economic function of the university in terms of…
The expansive production of data in materials science, their widespread sharing and repurposing requires educated support and stewardship. In order to ensure that this need helps rather than hinders scientific work, the implementation of…
The number of scientific papers grows exponentially in many disciplines. The share of online available papers grows as well. At the same time, the period of time for a paper to loose at chance to be cited anymore shortens. The decay of the…
The search process of scientific articles (papers) and review articles (reviews) is one of the pillars of the scientific world, and is performed by people in the research as well as for people who want to keep abreast specific topics.…
By bringing together code, text, and examples, Jupyter notebooks have become one of the most popular means to produce scientific results in a productive and reproducible way. As many of the notebook authors are experts in their scientific…
Cloud computing provides a great opportunity for scientists, as it enables large-scale experiments that cannot are too long to run on local desktop machines. Cloud-based computations can be highly parallel, long running and data-intensive,…
Scientific publishing seems to be at a turning point. Its paradigm has stayed basically the same for 300 years but is now challenged by the increasing volume of articles that makes it very hard for scientists to stay up to date in their…
Scientists strive to make their datasets available in open repositories, with the goal that they be findable, accessible, interoperable, and reusable (FAIR). Although it is hard for most investigators to remember all the guiding principles…
Communicating new scientific discoveries is key to human progress. Yet, this endeavor is hindered by monetary restrictions for publishing one's findings and accessing other scientists' reports. This process is further exacerbated by a large…