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In this paper homogenization of a mathematical model for plant tissue biomechanics is presented. The microscopic model constitutes a strongly coupled system of reaction-diffusion-convection equations for chemical processes in plant cells,…

Analysis of PDEs · Mathematics 2017-08-24 Andrey Piatnitski , Mariya Ptashnyk

We propose a novel approach to model amorphous materials using a first principles density functional method while simultaneously enforcing agreement with selected experimental data. We illustrate our method with applications to amorphous…

Materials Science · Physics 2009-11-10 Parthapratim Biswas , De Nyago Tafen , Raymond Atta-Fynn , D. A. Drabold

Shape memory alloys are remarkable 'smart' materials used in a broad spectrum of applications, ranging from aerospace to robotics, thanks to their unique thermomechanical coupling capabilities. Given the complex properties of shape memory…

Computational Engineering, Finance, and Science · Computer Science 2024-02-19 C. Erdogan , T. Bode , P. Junker

During growth, tissue expands and deforms. Given its elastic properties, stresses emerge in an expanding and deforming tissue. Cell rearrangements can dissipate these stresses and numerous experiments confirm the viscoelastic properties of…

Tissues and Organs · Quantitative Biology 2017-10-20 M. D. Peters , D. Iber

The elastic properties of a self-assembled bilayer membrane are studied using the self-consistent field theory, applied to a model system composed of flexible amphiphilic chains dissolved in hydrophilic polymeric solvents. Examining the…

Biological Physics · Physics 2013-07-19 Jianfeng Li , Kyle A. Pastor , An-Chang Shi , Friederike Schmid , Jiajia Zhou

Bio-inspired materials are commonly used in the development of functional devices. The fabrication of artificial cilia mimicking the biological functions has emerged as a promising strategy for fluid manipulation in miniaturized systems. In…

Soft Condensed Matter · Physics 2021-09-21 Aline Grein-Iankovski , Alain Graillot , Milad Radiom , Watson Loh , Jean-François Berret

The anchoring biofilm layer is expected to exhibit a different response to environmental stresses than for portions in the bulk, due to the protection from other strata and the proximity to the attachment surface. The effect of hydrodynamic…

Biological Physics · Physics 2021-10-22 Mirpouyan Zarabadi , François Paquet-Mercier , Steve J. Charette , Jesse Greener

Thin bilayers made of elastic sheets with different strain recoveries can be used for dynamic shape morphing through ambient stimuli, such as temperature, mass diffusion, and light. As a fundamentally different approach to designing…

Soft Condensed Matter · Physics 2023-11-01 Wenya Shu , C. Nadir Kaplan , Justin R. Barone

Motivated by elastography that utilizes tissue mechanical properties as biomarkers for liver disease, with the eventual objective of quantitatively linking histopathology and bulk mechanical properties, we develop a micromechanical modeling…

Biological Physics · Physics 2025-01-06 Haritya Shah , Murthy N. Guddati

This paper proposes the response surface method for finite element model updating. The response surface method is implemented by approximating the finite element model surface response equation by a multi-layer perceptron. The updated…

Computational Engineering, Finance, and Science · Computer Science 2007-05-23 Tshilidzi Marwala

This study is focused on the mechanical characterization of materials used in microelectronic and micro- electromechanical systems (MEMS) devices. In order to determine their mechanical parameters, a new deformation bench test with suitable…

Other Computer Science · Computer Science 2008-12-18 C. Seguineau , M. Ignat , C. Malhaire , S. Brida , X. Lafontan , J. -M. Desmarres , C. Josserond , L. Debove

We introduce a data-driven fractional modeling framework aimed at complex materials, and particularly bio-tissues. From multi-step relaxation experiments of distinct anatomical locations of porcine urinary bladder, we identify an anomalous…

Numerical Analysis · Mathematics 2021-10-04 Jorge L. Suzuki , Tyler G. Tuttle , Sara Roccabianca , Mohsen Zayernouri

Manipulation of thin sheets by folding and cutting offers opportunity to engineer structures with novel mechanical properties, and to prescribe complex force-displacement relationships via material elasticity in combination with the…

Applied Physics · Physics 2017-07-13 Nigamaa Nayakanti , Sameh H. Tawfick , A. John Hart

A continuum model of epithelial tissue mechanics was formulated using cellular-level mechanical ingredients and cell morphogenetic processes, including cellular shape changes and cellular rearrangements. This model can include finite…

Tissues and Organs · Quantitative Biology 2017-09-06 Shuji Ishihara , Philippe Marcq , Kaoru Sugimura

A contemporary procedure to grow artificial tissue is to seed cells onto a porous biomaterial scaffold and culture it within a perfusion bioreactor to facilitate the transport of nutrients to growing cells. Typical models of cell growth for…

Tissues and Organs · Quantitative Biology 2018-05-01 Andrew L. Krause , Dmitry Beliaev , Robert A. Van Gorder , Sarah L. Waters

We consider a multiscale approach based on immersed methods for the efficient computational modeling of tissues composed of an elastic matrix (in two or three-dimensions) and a thin vascular structure (treated as a co-dimension two…

Numerical Analysis · Mathematics 2021-11-18 Luca Heltai , Alfonso Caiazzo

A novel finite element framework is proposed for the numerical simulation of two phase flows with surface tension. The Level-Set (LS) method with piece-wise quadratic (P2) interpolation for the liquid-gas interface is used in order to reach…

Computational Engineering, Finance, and Science · Computer Science 2020-10-27 Modesar Shakoor , Chung Hae Park

This paper presents a general, nonlinear isogeometric finite element formulation for rotation-free shells with embedded fibers that captures anisotropy in stretching, shearing, twisting and bending -- both in-plane and out-of-plane. These…

Computational Engineering, Finance, and Science · Computer Science 2023-06-06 Thang Xuan Duong , Mikhail Itskov , Roger Andrew Sauer

This study presents a novel thermocouple instrument designed for precise temperature monitoring within biological tissues and cells, addressing a significant gap in biological research. Constructed on a Silicon-On-Insulator (SOI) substrate,…

A novel approach is presented to efficiently include transport effects in thin active material coating layers of all-solid-state batteries using a dimensionally reduced formulation embedded into a three-dimensionally resolved coupled…

Chemical Physics · Physics 2023-07-06 Stephan Sinzig , Christoph P. Schmidt , Wolfgang A. Wall
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