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pyscreener is a Python library that seeks to alleviate the challenges of large-scale structure-based design using computational docking. It provides a simple and uniform interface that is agnostic to the backend docking engine with which to…

Quantitative Methods · Quantitative Biology 2022-05-05 David E. Graff , Connor W. Coley

We present pyroomacoustics, a software package aimed at the rapid development and testing of audio array processing algorithms. The content of the package can be divided into three main components: an intuitive Python object-oriented…

Sound · Computer Science 2019-05-08 Robin Scheibler , Eric Bezzam , Ivan Dokmanić

The sensor placement problem is a common problem that arises when monitoring correlated phenomena, such as temperature, precipitation, and salinity. Existing approaches to this problem typically formulate it as the maximization of…

Robotics · Computer Science 2024-08-23 Kalvik Jakkala , Srinivas Akella

Package spar for R builds ensembles of predictive generalized linear models with high-dimensional predictors. It employs an algorithm utilizing variable screening and random projection tools to efficiently handle the computational…

Computation · Statistics 2024-11-28 Roman Parzer , Laura Vana-Gür , Peter Filzmoser

PySR is an open-source library for practical symbolic regression, a type of machine learning which aims to discover human-interpretable symbolic models. PySR was developed to democratize and popularize symbolic regression for the sciences,…

Instrumentation and Methods for Astrophysics · Physics 2023-05-08 Miles Cranmer

Deep learning has had remarkable success in robotic perception, but its data-centric nature suffers when it comes to generalizing to ever-changing environments. By contrast, physics-based optimization generalizes better, but it does not…

SparseChem provides fast and accurate machine learning models for biochemical applications. Especially, the package supports very high-dimensional sparse inputs, e.g., millions of features and millions of compounds. It is possible to train…

Machine Learning · Statistics 2022-03-10 Adam Arany , Jaak Simm , Martijn Oldenhof , Yves Moreau

Recreating complex, high-dimensional global fields from limited data points is a grand challenge across various scientific and industrial domains. Given the prohibitive costs of specialized sensors and the frequent inaccessibility of…

ProSper is a python library containing probabilistic algorithms to learn dictionaries. Given a set of data points, the implemented algorithms seek to learn the elementary components that have generated the data. The library widens the scope…

Signal Processing · Electrical Eng. & Systems 2019-08-20 Georgios Exarchakis , Jörg Bornschein , Abdul-Saboor Sheikh , Zhenwen Dai , Marc Henniges , Jakob Drefs , Jörg Lücke

Support estimation (SE) of a sparse signal refers to finding the location indices of the non-zero elements in a sparse representation. Most of the traditional approaches dealing with SE problem are iterative algorithms based on greedy…

Signal Processing · Electrical Eng. & Systems 2026-05-06 Mehmet Yamac , Mete Ahishali , Serkan Kiranyaz , Moncef Gabbouj

The Python Battery Optimisation and Parameterisation (PyBOP) package provides methods for estimating and optimising battery model parameters, offering both deterministic and stochastic approaches with example workflows to assist users.…

Systems and Control · Electrical Eng. & Systems 2026-01-16 Brady Planden , Nicola E. Courtier , Martin Robinson , Agriya Khetarpal , Ferran Brosa Planella , David A. Howey

This chapter focuses on active sensing using sparse arrays. In active sensing applications, such as radar, sonar, wireless communications, and medical ultrasound, a collection of sensors probes the environment by emitting self-generated…

Signal Processing · Electrical Eng. & Systems 2026-01-22 Robin Rajamäki , Visa Koivunen

A unified view of sparse signal processing is presented in tutorial form by bringing together various fields. For each of these fields, various algorithms and techniques, which have been developed to leverage sparsity, are described…

Information Theory · Computer Science 2009-02-12 F. Marvasti , A. Amini , F. Haddadi , M. Soltanolkotabi , B. H. Khalaj , A. Aldroubi , S. Holm , S. Sanei , J. Chambers

Soft sensing is a way to indirectly obtain information of signals for which direct sensing is difficult or prohibitively expensive. It may not \textit{a priori} be evident which sensors provide useful information about the target signal,…

Systems and Control · Electrical Eng. & Systems 2024-09-17 Le Wang , Ying Wang , Yu Qiu , Mian Li , Håkan Hjalmarsson

We present SPEAR, an open-source python library for data programming with semi supervision. The package implements several recent data programming approaches including facility to programmatically label and build training data. SPEAR…

`scores` is a Python package containing mathematical functions for the verification, evaluation and optimisation of forecasts, predictions or models. It supports labelled n-dimensional (multidimensional) data, which is used in many…

The goal of hyperparameter tuning (or hyperparameter optimization) is to optimize the hyperparameters to improve the performance of the machine or deep learning model. spotPython (``Sequential Parameter Optimization Toolbox in Python'') is…

Machine Learning · Computer Science 2023-06-08 Thomas Bartz-Beielstein

Compressive sensing (CS) exploits sparsity to recover sparse or compressible signals from dimensionality reducing, non-adaptive sensing mechanisms. Sparsity is also used to enhance interpretability in machine learning and statistics…

Information Theory · Computer Science 2015-07-21 Anastasios Kyrillidis , Luca Baldassarre , Marwa El-Halabi , Quoc Tran-Dinh , Volkan Cevher

Sparse sensor placement is a central challenge in the efficient characterization of complex systems when the cost of acquiring and processing data is high. Leading sparse sensing methods typically exploit either spatial or temporal…

Optimization and Control · Mathematics 2022-06-08 Thomas L. Mohren , Thomas L. Daniel , Steven L. Brunton , Bingni W. Brunton

Compressed sensing is a signal processing technique whereby the limits imposed by the Shannon--Nyquist theorem can be exceeded provided certain conditions are imposed on the signal. Such conditions occur in many real-world scenarios, and…

Information Theory · Computer Science 2018-02-16 Fintan Hegarty , Padraig Ó Catháin , Yunbin Zhao