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Computational hemodynamics models are becoming increasingly useful in the management and prognosis of complex, multiscale pathologies, including those attributed to the development of pulmonary vascular disease. However, diseases like…

Tissues and Organs · Quantitative Biology 2025-06-06 Mitchel J. Colebank , Naomi C. Chesler

Background: Inference from fMRI data faces the challenge that the hemodynamic system that relates neural activity to the observed BOLD fMRI signal is unknown. New Method: We propose a new Bayesian model for task fMRI data with the following…

Applications · Statistics 2020-06-01 Josef Wilzén , Anders Eklund , Mattias Villani

Mechanistic mathematical models of within-host viral dynamics are tools for understanding how a virus' biology and its interaction with the immune system shape the infectivity of a host. The biology of the process is encoded by the…

Applications · Statistics 2025-12-11 Dylan J. Morris , Lauren Kennedy , Andrew J. Black

The use of networks to integrate different genetic, proteomic, and metabolic datasets has been proposed as a viable path toward elucidating the origins of specific diseases. Here we introduce a new phenotypic database summarizing…

Biological Physics · Physics 2015-05-14 Cesar A. Hidalgo , Nicholas Blumm , Albert-Laszlo Barabasi , Nicholas Christakis

Background: Cardiovascular diseases (CVDs) are among the leading causes of death worldwide. Predictive scores providing personalised risk of developing CVD are increasingly used in clinical practice. Most scores, however, utilise a…

Machine Learning · Computer Science 2021-04-21 Nikola Dolezalova , Angus B. Reed , Alex Despotovic , Bernard Dillon Obika , Davide Morelli , Mert Aral , David Plans

The availability of large scale databases containing imaging and non-imaging data, such as the UK Biobank, represents an opportunity to improve our understanding of healthy and diseased bodily function. Cardiac motion atlases provide a…

Computer Vision and Pattern Recognition · Computer Science 2021-06-24 Esther Puyol-Anton , Bram Ruijsink , Helene Langet , Mathieu De Craene , Paolo Piro , Julia A. Schnabel , Andrew P. King

Clinically significant portal hypertension (CSPH) is a severe complication of chronic liver disease associated with cirrhosis, which is diagnosed by the measurement of hepatic venous pressure gradient (HVPG). However, HVPG measurement is…

Medical Physics · Physics 2021-07-13 Kexin Wang , Shuo Wang , Minghua Xiong , Chengyan Wang , He Wang

Heart transplant patients are followed with periodic right heart catheterizations (RHCs) to identify post-transplant complications and guide treatment. Post-transplant positive outcomes are associated with a steady reduction of right…

Tissues and Organs · Quantitative Biology 2019-12-11 Amanda L. Colunga , Karam G. Kim , N. Payton Woodall , Todd F. Dardas , John H. Gennari , Mette S. Olufsen , Brian E. Carlson

Mathematical models and numerical simulations are widely used in the field of hemodynamics, representing a valuable resource to better understand physiological and pathological processes. The theory behind the phenomenon is closely related…

Fluid Dynamics · Physics 2021-06-15 Giulia Bertaglia , Valerio Caleffi , Alessandro Valiani

Long-term pain conditions after surgery and patients' responses to pain relief medications are not yet fully understood. While recent studies developed an index for nociception level of patients under general anesthesia, based on multiple…

Signal Processing · Electrical Eng. & Systems 2021-09-03 Raheleh Baharloo , Jose C. Principe , Parisa Rashidi , Patrick J. Tighe

A deep latent variable model is a powerful method for capturing complex distributions. These models assume that underlying structures, but unobserved, are present within the data. In this dissertation, we explore high-dimensional problems…

Machine Learning · Computer Science 2024-06-13 Khuong Vo

Background and Objective: The role of red blood cell dynamics is emphasised in certain cardiovascular diseases, and thus needs to be closely studied. A multiphase model of blood flow allows the resolution of locally varying density of red…

Fluid Dynamics · Physics 2021-10-07 Konstantinos G. Lyras , Jack Lee

There is currently limited understanding of the role played by haemodynamic forces on the processes governing vascular development. One of many obstacles to be overcome is being able to measure those forces, at the required resolution…

Microvascular disease is a contributor to persistent pulmonary hypertension in those with chronic thromboembolic pulmonary hypertension (CTEPH). The heterogenous nature of the micro and macrovascular defects motivates the use of…

Quantitative Methods · Quantitative Biology 2024-06-10 Amirreza Kachabi , Mitchel J. Colebank , Sofia Altieri Correa , Naomi C. Chesler

The network representation is becoming increasingly popular for the description of cardiovascular interactions based on the analysis of multiple simultaneously collected variables. However, the traditional methods to assess network links…

In nuclear imaging, limited resolution causes partial volume effects (PVEs) that affect image sharpness and quantitative accuracy. Partial volume correction (PVC) methods incorporating high-resolution anatomical information from CT or MRI…

Image and Video Processing · Electrical Eng. & Systems 2022-12-06 Huidong Xie , Zhao Liu , Luyao Shi , Kathleen Greco , Xiongchao Chen , Bo Zhou , Attila Feher , John C. Stendahl , Nabil Boutagy , Tassos C. Kyriakides , Ge Wang , Albert J. Sinusas , Chi Liu

We introduce a multiphysics and geometric multiscale computational model, suitable to describe the hemodynamics of the whole human heart, driven by a four-chamber electromechanical model. We first present a study on the calibration of the…

Numerical Analysis · Mathematics 2024-03-06 Alberto Zingaro , Michele Bucelli , Roberto Piersanti , Francesco Regazzoni , Luca Dede' , Alfio Quarteroni

The liver has a unique blood supply system and plays an important role in the human blood circulatory system. Thus, hemodynamic problems related to the liver serve as an important part in clinical diagnosis and treatment. Although…

Numerical Analysis · Mathematics 2021-10-15 Ting Wu , Keqin Liu , Emily Fainman , Ying Wang

Cardiovascular magnetic resonance imaging is emerging as a crucial tool to examine cardiac morphology and function. Essential to this endeavour are anatomical 3D surface and volumetric meshes derived from CMR images, which facilitate…

Image and Video Processing · Electrical Eng. & Systems 2025-05-20 Nicolás Gaggion , Benjamin A. Matheson , Yan Xia , Rodrigo Bonazzola , Nishant Ravikumar , Zeike A. Taylor , Diego H. Milone , Alejandro F. Frangi , Enzo Ferrante

In this paper, a multiscale virtual particle based elastic network model (MVP-ENM) is proposed for biomolecular normal mode analysis. The multiscale virtual particle model is proposed for the discretization of biomolecular density data in…

Biomolecules · Quantitative Biology 2019-03-13 Kelin Xia