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We present a two-dimensional continuum model of tumor growth, which treats the tissue as a composition of six distinct fluid phases; their dynamics are governed by the equations of mass and momentum conservation. Our model divides the…

Populations and Evolution · Quantitative Biology 2021-02-12 I. Lampropoulos , M. Kavousanakis

Rich data and powerful machine learning models allow us to design drugs for a specific protein target \textit{in silico}. Recently, the inclusion of 3D structures during targeted drug design shows superior performance to other target-free…

Biomolecules · Quantitative Biology 2023-03-08 Jiaqi Guan , Wesley Wei Qian , Xingang Peng , Yufeng Su , Jian Peng , Jianzhu Ma

We discuss in detail a recently proposed hybrid particle-continuum scheme for complex fluids and evaluate it at the example of a confined homopolymer solution in slit geometry. The hybrid scheme treats polymer chains near the impenetrable…

Soft Condensed Matter · Physics 2016-10-28 Shuanhu Qi , Hans Behringer , Thorsten Raasch , Friederike Schmid

The two-scale computational homogenization method is proposed for modelling of locally periodic fluid-saturated media subjected a to large deformation induced by quasistatic loading. The periodic heterogeneities are relevant to the…

Numerical Analysis · Mathematics 2022-02-11 Vladimír Lukeš , Eduard Rohan

A homogenization approach is proposed for the treatment of porous wall boundary conditions in the computation of compressible viscous flows. Like any other homogenization approach, it eliminates the need for pore-resolved fluid meshes and…

Fluid Dynamics · Physics 2020-12-15 Daniel Z. Huang , Man Long Wong , Sanjiva K. Lele , Charbel Farhat

Automatic image segmentation becomes very crucial for tumor detection in medical image processing.In general, manual and semi automatic segmentation techniques require more time and knowledge. However these drawbacks had overcome by…

Computer Vision and Pattern Recognition · Computer Science 2016-03-09 D. Anithadevi , K. Perumal

Multi-site structural MRI is increasingly used in neuroimaging studies to diversify subject cohorts. However, combining MR images acquired from various sites/centers may introduce site-related non-biological variations. Retrospective image…

Image and Video Processing · Electrical Eng. & Systems 2024-08-20 Mengqi Wu , Minhui Yu , Shuaiming Jing , Pew-Thian Yap , Zhengwu Zhang , Mingxia Liu

Intracardiac flow patterns are shaped by the coupled motion of the cardiac chambers and heart valves and provide important information about cardiac function. However, clinical flow imaging remains limited by exam times, noise, resolution,…

Image and Video Processing · Electrical Eng. & Systems 2026-05-12 Fanwei Kong , Aaron Brown , Michael Loecher , Perry S. Choi , Lei Shi , Michael Ma , Daniel B. Ennis , Alison Marsden

The landscape of computational modeling in cancer systems biology is diverse, offering a spectrum of models and frameworks, each with its own trade-offs and advantages. Ideally, models are meant to be useful in refining hypotheses, to…

Dynamical Systems · Mathematics 2024-05-31 Erik Blom , Stefan Engblom

Microfluidics proved to be a key technology in various applications, allowing to reproduce large-scale laboratory settings at a more sustainable small-scale. The current effort is focused on enhancing the mixing process of different passive…

There are several numerical models that describe real phenomena being used to solve complex problems. For example, an accurate numerical breast model can provide assistance to surgeons with visual information of the breast as a result of a…

Medical Physics · Physics 2020-03-17 Diogo Lopes , António Ramires Fernandes , Stéphane Clain

Stable Diffusion Models (SDMs) have shown remarkable proficiency in image synthesis. However, their broad application is impeded by their large model sizes and intensive computational requirements, which typically require expensive cloud…

Computer Vision and Pattern Recognition · Computer Science 2024-10-31 Chenqian Yan , Songwei Liu , Hongjian Liu , Xurui Peng , Xiaojian Wang , Fangmin Chen , Lean Fu , Xing Mei

In volume-to-volume translations in medical images, existing models often struggle to capture the inherent volumetric distribution using 3D voxelspace representations, due to high computational dataset demands. We present Score-Fusion, a…

Computer Vision and Pattern Recognition · Computer Science 2025-02-10 Xiyue Zhu , Dou Hoon Kwark , Ruike Zhu , Kaiwen Hong , Yiqi Tao , Shirui Luo , Yudu Li , Zhi-Pei Liang , Volodymyr Kindratenko

Three intra-aortic blood pumps were evaluated and compared using CFD simulations. The aim of this study is to evaluate the hemodynamic performance and calculate the hemolytic potential of the pumps. The flow fields generated by the pumps…

Medical Physics · Physics 2026-03-31 Osman Aycan , Yeojin Park , Lyes Kadem

In this work, we introduce a variant of the Gatenby-Gawlinski model for acid-mediated tumor invasion in the one-dimensional experimental setting, accounting for heterogeneous diffusion of the lactic acid across the surrounding healthy…

Analysis of PDEs · Mathematics 2025-11-11 Chiara Simeoni , Elisa Scanu , Donato Pera , Corrado Mascia

In this work, we consider two kinds of model reduction techniques to simulate blood flow through the largest systemic arteries, where a stenosis is located in a peripheral artery i.e. in an artery that is located far away from the heart.…

Numerical Analysis · Mathematics 2018-10-09 Tobias Köppl , Gabriele Santin , Bernard Haasdonk , Rainer Helmig

Tracking and characterizing the blood uptake process within solid pancreatic tumors and the subsequent spatio-temporal distribution of red blood cells are critical to the clinical diagnosis of the cancer. This systematic computational study…

Medical Physics · Physics 2021-11-04 Mohammad Mehedi Hasan Akash , Nilotpal Chakraborty , Saikat Basu

Diffusion models have advanced unsupervised anomaly detection by improving the transformation of pathological images into pseudo-healthy equivalents. Nonetheless, standard approaches may compromise critical information during pathology…

Image and Video Processing · Electrical Eng. & Systems 2024-03-14 Cosmin I. Bercea , Benedikt Wiestler , Daniel Rueckert , Julia A. Schnabel

This paper presents a numerical method for the simulation of multiscale materials composed of an elastic matrix and slender active inclusions. The setting is motivated by the modeling of vascularized tissues and by problems arising in the…

Numerical Analysis · Mathematics 2025-08-19 Camilla Belponer , Alfonso Caiazzo , Luca Heltai

Systematic in vivo validations of computational models of the aortic valve remain scarce, despite successful validation against in vitro data. Utilizing a combination of computed tomography and 4D flow magnetic resonance imaging data, we…