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In this paper, we develop the theory for constructing DNA cyclic codes of odd length over $R=\Z_4[u]/\langle u^2-1 \rangle$ based on the deletion distance. Firstly, we relate DNA pairs with a special 16 elements of ring $R$. Cyclic codes of…

Information Theory · Computer Science 2016-03-15 Sukhamoy Pattanayak , Abhay Kumar Singh

DNA storage has emerged as an important area of research. The reliability of DNA storage system depends on designing the DNA strings (called DNA codes) that are sufficiently dissimilar. In this work, we introduce DNA codes that satisfy a…

Information Theory · Computer Science 2022-11-28 Krishna Gopal Benerjee , Sourav Deb , Manish K Gupta

We present new constructions of binary quantum codes from quaternary linear Hermitian self-dual codes. Our main ingredients for these constructions are nearly self-orthogonal cyclic or duadic codes over F_4. An infinite family of…

Information Theory · Computer Science 2022-11-03 Reza Dastbasteh , Petr Lisonek

In this paper, we investigate $\theta$-skew cyclic codes over the ring $R= \mathbb{F}_4 + v \mathbb{F}_4$, where $v^2=v$ and $\theta$ is a non-trivial automorphism over $\mathbb{F}_4 + v \mathbb{F}_4$. This allows us to describe DNA code…

Information Theory · Computer Science 2025-06-03 Joël Kabore , Mohammed Elhassani Charkani

This work introduces a novel approach to constructing DNA codes from linear codes over a non-chain extension of $\mathbb{Z}_4$. We study $(\text{\textbaro},\mathfrak{d}, \gamma)$-constacyclic codes over the ring…

Information Theory · Computer Science 2025-02-25 Priyanka Sharma , Ashutosh Singh , Om Prakash

Self-dual codes over $\Z_2\times\Z_4$ are subgroups of $\Z_2^\alpha \times\Z_4^\beta$ that are equal to their orthogonal under an inner-product that relates to the binary Hamming scheme. Three types of self-dual codes are defined. For each…

Information Theory · Computer Science 2009-10-19 J. Borges , S. T. Dougherty , C. Fernandez-Cordoba

DNA sequences are prone to creating secondary structures by folding back on themselves by non-specific hybridization among its nucleotides. The formation of secondary structures makes the sequences chemically inactive towards synthesis and…

Information Theory · Computer Science 2022-11-30 Siddhartha Siddhiprada Bhoi , Paramapalli Udaya , Abhay Kumar Singh

In this work, extension theorems are generalized to self-dual codes over rings and as applications many new binary self-dual extremal codes are found from self-dual codes over F_2^m+uF_2^m for m = 1, 2. The duality and distance preserving…

Information Theory · Computer Science 2016-11-26 Abidin Kaya , Bahattin Yildiz

DNA codes have many applications, such as in data storage, DNA computing, etc. Good DNA codes have large sizes and satisfy some certain constraints. In this paper, we present a new construction method for reversible DNA codes. We show that…

Information Theory · Computer Science 2024-03-19 Xueyan Chen , Whan-Hyuk Choi , Hongwei Liu

DNA strings and their properties are widely studied since last 20 years due to its applications in DNA computing. In this area, one designs a set of DNA strings (called DNA code) which satisfies certain thermodynamic and combinatorial…

Information Theory · Computer Science 2025-10-03 Krishna Gopal Benerjee , Manish K Gupta

We derive theoretical upper and lower bounds on the maximum size of DNA codes of length n with constant GC-content w and minimum Hamming distance d, both with and without the additional constraint that the minimum Hamming distance between…

Combinatorics · Mathematics 2007-05-23 Oliver D. King

In this article, we construct new non-binary quantum codes from skew constacyclic codes over finite commutative non-chain ring $\mathcal{R}= \mathbb{F}_{p^m}[v]/\langle v^3 =v \rangle$ where $p$ is an odd prime and $m \geq 1$. In order to…

Information Theory · Computer Science 2020-10-15 Ram Krishna Verma , Om Prakash , Ashutosh Singh

A method to construct and count all the linear codes (of arbitrary length) in $\mathbb{F}_{4}$ that are invariant under reverse permutation and that contain the repetition code is presented. These codes are suitable for constructing DNA…

Information Theory · Computer Science 2025-06-25 E. J. García-Claro

Based on cyclic and consta-cyclic simplex codes, a new explicit construction of a family of two-weight codes is presented. These two-weight codes obtained are in the form of 2-generator quasi-cyclic, or quasi-twisted structure. Based on…

Information Theory · Computer Science 2009-01-09 Eric Z. Chen

In this paper, constructions of some double circulant self-dual codes by generalized cyclotomic classes of order two are presented. This technique is applied to [72, 36, 12] binary highest know self-dual codes to obtain self-dual codes over…

Information Theory · Computer Science 2019-12-16 Wenpeng Gao , Tongjiang Yan

We introduce a consistent and efficient method to construct self-dual codes over $GF(q)$ with symmetric generator matrices from a self-dual code over $GF(q)$ of smaller length where $q \equiv 1 \pmod 4$. Using this method, we improve the…

Information Theory · Computer Science 2021-02-22 Whan-Hyuk Choi , Jon-Lark Kim

To increase the information capacity of DNA storage, composite DNA letters were introduced. We propose a novel channel model for composite DNA in which composite sequences are decomposed into ordered standard non-composite sequences. The…

Information Theory · Computer Science 2025-10-31 Besart Dollma , Ohad Elishco , Eitan Yaakobi

For a prime $p$ and a positive integer $m$, let $\mathbb{F}_{p^m}$ be the finite field of characteristic $p$, and $\mathfrak{R}_l:=\mathbb{F}_{p^m}[v]/\langle v^l-v\rangle$ be a non-chain ring. In this paper, we study the…

Information Theory · Computer Science 2023-12-14 Ashutosh Singh , Priyanka Sharma , Om Prakash

In this paper, a family of reducible cyclic codes over GF(p) whose duals have four zeros is presented, where p is an odd prime. Furthermore, the weight distribution of these cyclic codes is determined.

Information Theory · Computer Science 2014-04-09 Yan Liu

In this paper we investigate codes over finite commutative rings R, whose generator matrices are built from \$\alpha\$-circulant matrices. For a non-trivial ideal I<R we give a method to lift such codes over R/I to codes over R, such that…

Combinatorics · Mathematics 2015-03-11 Michael Kiermaier , Alfred Wassermann