English
Related papers

Related papers: Phase field models of active matter

200 papers

To model mechanically-driven phase transformations using the phase-field theory, suitable models are needed for describing the mechanical fields related to individual phase-fields in the interfacial regions. They play a crucial role in…

Numerical Analysis · Mathematics 2025-09-22 Mohammad Sarhil , Oleg Shchyglo , Hesham Salama , Dominik Brands , Ingo Steinbach , Jörg Schröder

We discuss an active phase field crystal (PFC) model that describes a mixture of active and passive particles. First, a microscopic derivation from dynamical density functional theory (DDFT) is presented that includes a systematic treatment…

Soft Condensed Matter · Physics 2022-10-26 Michael te Vrugt , Max Philipp Holl , Aron Koch , Raphael Wittkowski , Uwe Thiele

Research in cell biology is steadily contributing new knowledge about many different aspects of physiological processes like polymerization, both with respect to the involved molecular structures as well as their related function.…

Human-Computer Interaction · Computer Science 2014-07-15 Ivan Kolesar , Julius Parulek , Ivan Viola , Stefan Bruckner , Anne-Kristin Stavrum , Helwig Hauser

We present a simple yet generic model for the behavior of a system of many surface-attached flexible polymers with rigid side chains. Beyond its potential application in describing the dynamics of the extracellular matrix of mammalian…

Statistical Mechanics · Physics 2008-04-01 Marcel Hellmann , Youjin Deng , Matthias Weiss , Dieter W. Heermann

We develop and analyse the first second-order phase-field model to combine melting and dissolution in multi-component flows. This provides a simple and accurate way to simulate challenging phase-change problems in existing codes.…

Computational Physics · Physics 2020-12-09 Eric W. Hester , Louis-Alexandre Couston , Benjamin Favier , Keaton J. Burns , Geoffrey M. Vasil

Conventional phase-field models often drive solid-solid interfaces to coalesce when in close proximity. This feature limits their use for processes like diffusion bonding, where the interfaces might need to remain distinct under certain…

Materials Science · Physics 2026-02-20 Maryam Khodadad , Noel Walkington , Suresh Kalyanam , Matteo Pozzi , Kaushik Dayal

It is increasingly being realized that liquid-crystalline features can play an important role in the properties and dynamics of cell monolayers. Here, we present a cell-based model of cell layers, based on the phase-field formulation, that…

Soft Condensed Matter · Physics 2022-04-28 Aleksandra Ardaševa , Romain Mueller , Amin Doostmohammadi

In this paper, a thermodynamically consistent phase-field model is proposed to describe the mass transport and reaction processes of multiple species in a fluid. A key feature of this model is that reactions between different species occur…

Numerical Analysis · Mathematics 2025-03-24 Zhaoyang Wang , Huaxiong Huang , Ping Lin , Shixin Xu

Controlling interfaces of phase separating fluid mixtures is key to creating diverse functional soft materials. Traditionally, this is accomplished with surface-modifying chemical agents. Using experiment and theory, we study how mechanical…

Soft Condensed Matter · Physics 2022-08-15 Raymond Adkins , Itamar Kolvin , Zhihong You , Sven Witthaus , M. Cristina Marchetti , Zvonimir Dogic

We report a numerical simulation for the phase diagram of a simple two dimensional model, similar to one proposed by Noro and Frenkel [J. Chem. Phys. \textbf{114}, 2477 (2001)] for membrane proteins, but one that includes the role of the…

Soft Condensed Matter · Physics 2009-11-11 D. L. Pagan , A. Shiryayev , T. P. Connor , J. D. Gunton

Active matter research focuses on the emergent behavior among interacting self-propelled particles. Unification of seemingly disconnected paradigms -- active phase-separation of repulsive discs and collective motion of self-propelled rods…

Statistical Mechanics · Physics 2021-01-18 Robert Großmann , Igor S. Aranson , Fernando Peruani

This work overviews a new, recent success of phase-field modelling: its application to predicting the evolution of the corrosion front and the associated structural integrity challenges. Despite its important implications for society,…

Chemical Physics · Physics 2024-06-24 E. Martínez-Pañeda

Structure, function and dynamics of many biomolecular systems can be characterized by the energetic variational principle and the corresponding systems of partial differential equations (PDEs). This principle allows us to focus on the…

Numerical Analysis · Mathematics 2016-11-03 Guo-Wei Wei , Y. C. Zhou

We present the first application of phase field modeling to electrochemistry. A free energy functional that includes the electrostatic effect of charged particles leads to rich interactions between concentration, electrostatic potential,…

Materials Science · Physics 2007-05-23 J. E. Guyer , W. J. Boettinger , J. A. Warren , G. B. McFadden

Phase-field methods have long been used to model the flow of immiscible fluids. Their ability to naturally capture interface topological changes is widely recognized, but their accuracy in simulating flows of real fluids in practical…

Fluid Dynamics · Physics 2019-06-10 Baofang Song , Carlos Plana , Jose M. Lopez , Marc Avila

These lecture notes are designed to provide a brief introduction into the phenomenology of active matter and to present some of the analytical tools used to rationalize the emergent behavior of active systems. Such systems are made of…

Soft Condensed Matter · Physics 2018-07-02 Étienne Fodor , M. Cristina Marchetti

This article presents a multi-physics methodology for the numerical simulation of physical systems that involve the non-linear interaction of multi-phase reactive fluids and elastoplastic solids, inducing high strain-rates and high…

Computational Physics · Physics 2021-06-04 Tim Wallis , Philip T. Barton , Nikolaos Nikiforakis

The process of programmed cell death, namely apoptosis, is a natural mechanism that regulates healthy tissue, multicellular structures, and homeostasis. An improved understanding of apoptosis can significantly enhance our knowledge of…

Cell Behavior · Quantitative Biology 2026-03-12 Daniel A. Vaughan , Anna M. Piccinini , Mischa Zelzer , Etienne Farcot , Bindi S. Brook , Kris Van-der-Zee , Luis Espath

We consider a mixture of one neutral and two oppositely charged types of molecules confined to a surface. Using analytical techniques and molecular dynamics simulations, we construct the phase diagram of the system and exhibit the…

Soft Condensed Matter · Physics 2009-11-11 Sharon M. Loverde , Francisco Solis , Monica Olvera de la Cruz

We briefly review the state-of-the-art in phase-field modeling of microstructure evolution. The focus is placed on recent applications of phase-field simulations of solid-state microstructure evolution and solidification that have been…

Materials Science · Physics 2021-10-14 D. Tourret , H. Liu , J. LLorca