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We consider the modeling of data generated by a latent continuous-time Markov jump process with a state space of finite but unknown dimensions. Typically in such models, the number of states has to be pre-specified, and Bayesian inference…

Methodology · Statistics 2021-08-12 Yu Luo , David A. Stephens

Dengue is a vector-borne viral disease increasing dramatically over the past years due to improvement in human mobility. The movement of host individuals between and within the patches are captured via a residence-time matrix. A system of…

Populations and Evolution · Quantitative Biology 2018-10-04 Wolfgang Bock , Yashika Jayathunga

This paper is concerned with a stochastic model for the spread of an SEIR (susceptible -> exposed (=latent) -> infective -> removed) epidemic with a contact tracing scheme, in which removed individuals may name some of their infectious…

Probability · Mathematics 2015-12-08 Frank G Ball , Edward S Knock , Philip D O'Neill

We consider a Spatial Markov Chain model for the spread of viruses. The model is based on the principle to represent a graph connecting nodes, which represent humans. The vertices between the nodes represent relations between humans. In…

Populations and Evolution · Quantitative Biology 2020-04-14 Fred Vermolen

Many epidemic processes in networks spread by stochastic contacts among their connected vertices. There are two limiting cases widely analyzed in the physics literature, the so-called contact process (CP) where the contagion is expanded at…

Computational Physics · Physics 2010-02-19 S. Gomez , A. Arenas , J. Borge-Holthoefer , S. Meloni , Y. Moreno

Dengue remains one of Brazil's major epidemiological challenges, marked by strong intra-urban inequalities and the influence of climatic and socio-environmental factors. This study analyzed confirmed dengue cases in Recife from 2015 to 2024…

Progressive diseases worsen over time and are characterised by monotonic change in features that track disease progression. Here we connect ideas from two formerly separate methodologies -- event-based and hidden Markov modelling -- to…

Machine Learning · Computer Science 2021-06-07 Peter A. Wijeratne , Daniel C. Alexander

To investigate interactions between parasite species in a host, a population of field voles was studied longitudinally, with presence or absence of six different parasites measured repeatedly. Although trapping sessions were regular, a…

Applications · Statistics 2013-01-29 Chris Sherlock , Tatiana Xifara , Sandra Telfer , Mike Begon

A model describing the dynamics related to the spreading of non-lethal infectious diseases in a fixed-size population is proposed. The model consists of a non-linear delay-differential equation describing the time evolution of the increment…

Populations and Evolution · Quantitative Biology 2010-10-05 A. Noviello , F. Romeo , R. De Luca

This paper aims to extend the Besag model, a widely used Bayesian spatial model in disease mapping, to a non-stationary spatial model for irregular lattice-type data. The goal is to improve the model's ability to capture complex spatial…

Methodology · Statistics 2023-07-03 Esmail Abdul Fattah , Elias Krainski , Janet van Niekerk , Håvard Rue

We use a stochastic Markovian dynamics approach to describe the spreading of vector-transmitted diseases, like dengue, and the threshold of the disease. The coexistence space is composed by two structures representing the human and mosquito…

Populations and Evolution · Quantitative Biology 2013-01-01 David R. Souza , Tânia Tomé , Suani T. R. Pinho , Florisneide R. Barreto , Mário J. de Oliveira

The dynamics of many epidemic compartmental models for infectious diseases that spread in a single host population present a second-order phase transition. This transition occurs as a function of the infectivity parameter, from the absence…

Physics and Society · Physics 2023-01-02 Alex Arenas , Antonio Garijo , Sergio Gómez , Jordi Villadelprat

In regard to infectious diseases socioeconomic determinants are strongly associated with differential exposure and susceptibility however they are seldom accounted for by standard compartmental infectious disease models. These associations…

Applications · Statistics 2022-11-28 Alison C Hale , Jonathan M Read , Christopher P Jewell

Traditional disease transmission models assume that the infectious period is exponentially distributed with a recovery rate fixed in time and across individuals. This assumption provides analytical and computational advantages, however it…

Populations and Evolution · Quantitative Biology 2024-01-30 Laura Di Domenico , Eugenio Valdano , Vittoria Colizza

The effective control of infectious diseases relies on accurate assessment of the impact of interventions, which is often hindered by the complex dynamics of the spread of disease. A Beta-Dirichlet switching state-space transmission model…

Methodology · Statistics 2024-04-30 Jingxue Feng , Liangliang Wang

A new method is proposed to infer unobserved epidemic sub-populations by exploiting the synchronization properties of multistrain epidemic models. A model for dengue fever is driven by simulated data from secondary infective populations.…

Chaotic Dynamics · Physics 2014-10-31 Eric Forgoston , Leah B. Shaw , Ira B. Schwartz

As offered by the World Health Organisation (WHO), close to half of the population in the world's resides in dengue-risk zones. Dengue viruses are transmitted to individuals by Aedes mosquito species infected bite (Ae. Albopictus of Ae.…

Populations and Evolution · Quantitative Biology 2025-03-12 Burcu Gürbüz , Aytül Gökçe , Segun I. Oke , Michael O. Adeniyi , Mayowa M. Ojo

In this paper, we model a nonlinear dynamics of infectious diseases transfer. Particularly, we study possible applications to tubercular infection in models with different profiles (peak values) of the population density dependence on…

In this paper we propose some mathematical models for the transmission of dengue using a system of reaction-diffusion equations. The mosquitoes are divided into infected, uninfected and aquatic subpopulations, while the humans, which are…

Analysis of PDEs · Mathematics 2018-11-21 Felipo Bacani , Stylianos Dimas , Igor Leite Freire , Norberto Anibal Maidana , Mariano Torrisi

In this paper, two-state Markov switching models are proposed to study accident frequencies. These models assume that there are two unobserved states of roadway safety, and that roadway entities (roadway segments) can switch between these…

Applications · Statistics 2009-08-02 Nataliya V. Malyshkina , Fred L. Mannering , Andrew P. Tarko