Related papers: A Coding Theory Perspective on Multiplexed Molecul…
In the realm of drug discovery, DNA-encoded library (DEL) screening technology has emerged as an efficient method for identifying high-affinity compounds. However, DEL screening faces a significant challenge: noise arising from nonspecific…
Fault tolerance is a prerequisite for scalable quantum computing. Architectures based on 2D topological codes are effective for near-term implementations of fault tolerance. To obtain high performance with these architectures, we require a…
Contemporary quantum computers are inherently noisy, posing significant challenges for the development and testing of quantum software. Simplified or outdated noise assumptions can lead to incorrect assessments of program correctness,…
Due to the redundant nature of DNA synthesis and sequencing technologies, a basic model for a DNA storage system is a multi-draw "shuffling-sampling" channel. In this model, a random number of noisy copies of each sequence is observed at…
Quantum error correction is crucial for protecting quantum information against decoherence. Traditional codes like the surface code require substantial overhead, making them impractical for near-term, early fault-tolerant devices. We…
We consider a distributed detection problem within a wireless sensor network (WSN), where a substantial number of sensors cooperate to detect the existence of sparse stochastic signals. To achieve a trade-off between detection performance…
We propose a novel optimization-based decoding algorithm for LDPC-coded massive MIMO channels. The proposed decoding algorithm is based on a proximal gradient method for solving an approximate maximum a posteriori (MAP) decoding problem.…
In this work we study the single-shot performance of higher dimensional hypergraph product codes decoded using belief-propagation and ordered-statistics decoding [Panteleev and Kalachev, 2021]. We find that decoding data qubit and syndrome…
Maximum distance separable (MDS) array codes constitute an important class of error-correcting codes due to their optimal distance properties and their relevance in distributed storage systems. In this paper, we investigate the construction…
Fine-grained image hashing is a challenging problem due to the difficulties of discriminative region localization and hash code generation. Most existing deep hashing approaches solve the two tasks independently. While these two tasks are…
Metagenomic taxonomic annotation aims to identify the microbial origins of DNA fragments in environmental samples. Traditional methods that rely on sequence similarity are often constrained by the high microbial diversity and the…
Many satellite communication systems operating today employ low cost upconverters or downconverters which create phase noise. This noise can severely limit the information rate of the system and pose a serious challenge for the detection…
Counting cells in fluorescent microscopy is a tedious, time-consuming task that researchers have to accomplish to assess the effects of different experimental conditions on biological structures of interest. Although such objects are…
We propose a simple yet effective wireless network coding and decoding technique. It utilizes spatial diversity through cooperation between nodes which carry out distributed encoding operations dictated by generator matrices of linear block…
Millimeter wave (mmWave) and terahertz MIMO systems rely on pre-defined beamforming codebooks for both initial access and data transmission. Being pre-defined, however, these codebooks are commonly not optimized for specific environments,…
Magnetic Resonance Fingerprinting (MRF) is an emerging technology with the potential to revolutionize radiology and medical diagnostics. In comparison to traditional magnetic resonance imaging (MRI), MRF enables the rapid, simultaneous,…
Multiple reads of the same Flash memory cell with distinct word-line voltages provide enhanced precision for LDPC decoding. In this paper, the word-line voltages are optimized by maximizing the mutual information (MI) of the quantized…
Most human protein-coding genes can be transcribed into multiple possible distinct mRNA isoforms. These alternative splicing patterns encourage molecular diversity and dysregulation of isoform expression plays an important role in disease…
The statistical physics properties of low-density parity-check codes for the binary symmetric channel are investigated as a spin glass problem with multi-spin interactions and quenched random fields by the cavity method. By evaluating the…
Mitotic activity is a crucial proliferation biomarker for the diagnosis and prognosis of different types of cancers. Nevertheless, mitosis counting is a cumbersome process for pathologists, prone to low reproducibility, due to the large…