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Active particle systems are a class of non-equilibrium systems composed of self-propelled Brownian particles; through interactions between particles within the system, a variety of intriguing collective behaviors can emerge. Based on…

Soft Condensed Matter · Physics 2025-09-25 Sihang Guo , Guangyu Yang , Guoqing Meng , Yingying Wang , Junxing Pan , Jinjun Zhang

Two-dimensional shape-morphing networks are common in biological systems and have garnered attention due to their nontrivial physical properties that emanate from their cellular nature. Here, we present the fabrication and characterization…

Pattern-forming metamaterials feature microstructures specifically designed to change the material's macroscopic properties due to internal instabilities. These can be triggered either by mechanical deformation or, in the case of active…

Cytoskeletal networks can repair defects to maintain structural integrity. However, the mechanisms and dynamics of defect merging remain poorly understood. Here we report a geometry-tunable merging mechanism in microtubule-motor networks…

Soft Condensed Matter · Physics 2025-09-10 Fan Yang , Shichen Liu , Hao Wang , Heun Jin Lee , Rob Phillips , Matt Thomson

Interconnected ensembles of biological entities are perhaps some of the most complex systems that modern science has encountered so far. In particular, scientists have concentrated on understanding how the complexity of the interacting…

Pattern Formation and Solitons · Physics 2020-11-18 Bram A. Siebert , Cameron L. Hall , James P. Gleeson , Malbor Asllani

We propose a mechanism to control the formation of stable obstructions in two-dimensional micro-channels of variable sections taking advantage of the peculiar clustering property of active systems. Under the activation of the…

Soft Condensed Matter · Physics 2021-01-04 Lorenzo Caprini , Fabio Cecconi , Claudio Maggi , Umberto Marini Bettolo Marconi

In biological systems, molecular-scale forces and motions are pivotal for enabling processes like motility, shape change, and replication. These forces and motions are organized, amplified, and transmitted across macroscopic scales by…

We consider a three-dimensional network of aqueous droplets joined by single lipid bilayers to form a cohesive, tissue-like material. The droplets in these networks can be programmed to have distinct osmolarities so that osmotic gradients…

Soft Condensed Matter · Physics 2016-03-23 T. Zhang , Duanduan Wan , J. M. Schwarz , M. J. Bowick

Two different types of directed networks are investigated, transcriptional regulation networks and neural networks. The directed network structure are studied and also shown to reflect the different processes taking place on the networks.…

Disordered Systems and Neural Networks · Physics 2016-08-16 Andreas Grönlund

Controlling the flow and routing of data is a fundamental problem in many distributed networks, including transportation systems, integrated circuits, and the Internet. In the brain, synaptic plasticity rules have been discovered that…

Neural and Evolutionary Computing · Computer Science 2017-04-18 Jonathan Y. Suen , Saket Navlakha

Semiflexible biopolymer networks are commonly found in biological systems, from the cytoskeleton of cells to the extracellular matrix. Such networks often naturally occur as composites, in which various components interact to generate rich…

Soft Condensed Matter · Physics 2018-01-18 D. L. Humphries , J. A. Grogan , E. A. Gaffney

Each element in tensioned structural networks -- such as tensegrity, architectural fabrics, or medical braces/meshes -- requires a specific tension level to achieve and maintain the desired shape, stability, and compliance. These structures…

Graphics · Computer Science 2025-09-09 Thijs Masmeijer , Caleb Swain , Jeff Hill , Ed Habtour

Viewed under a fluorescence microscope, the actomyosin cytoskeleton presents vivid streaks of lines together with persistent oscillatory waves. Using an active hydrodynamic approach, we show how a uniform distribution of single or mixture…

Soft Condensed Matter · Physics 2025-04-25 Ayan Roychowdhury , Saptarshi Dasgupta , Madan Rao

Biological systems exhibit large-scale self-organized dynamics and structures which enable organisms to perform the functions of life. The field of active matter strives to develop and understand microscopically-driven nonequilibrium…

Soft Condensed Matter · Physics 2016-02-11 Michael F. Hagan , Aparna Baskaran

Experiments with networks of discrete reactive bistable electrochemical elements organized in regular and nonregular tree networks are presented to confirm an alternative to the Turing mechanism for the formation of self-organized…

Pattern Formation and Solitons · Physics 2016-11-15 N. E. Kouvaris , M. Sebek , A. S. Mikhailov , I. Z. Kiss

The response of complex networks to perturbations is of utmost importance in areas as diverse as ecosystem management, emergency response, and cell reprogramming. A fundamental property of networks is that the perturbation of one node can…

Molecular Networks · Quantitative Biology 2011-05-20 Sean P. Cornelius , William L. Kath , Adilson E. Motter

Recent advances in artificial intelligence have propelled the development of innovative computational materials modeling and design techniques. Generative deep learning models have been used for molecular representation, discovery, and…

Chemical Physics · Physics 2021-02-12 Navid Shervani-Tabar , Nicholas Zabaras

While modern deep networks have demonstrated remarkable versatility, their training dynamics remain poorly understood--often driven more by empirical tweaks than architectural insight. This paper investigates how internal structural choices…

Machine Learning · Computer Science 2025-08-26 Saleh Nikooroo , Thomas Engel

Robust coordination and organization in large ensembles of nonlinear oscillatory units play a vital role in a wide range of natural and engineered system. The control of self-organizing network-coupled systems has recently seen significant…

Adaptation and Self-Organizing Systems · Physics 2022-10-04 Per Sebastian Skardal , Alex Arenas

Reconstituted filamentous actin networks with myosin motor proteins form active gels, in which motor proteins generate forces that drive the network far from equilibrium. This motor activity can also strongly affect the network elasticity;…

Soft Condensed Matter · Physics 2010-09-21 C. P. Broedersz , F. C. MacKintosh