Related papers: Multistability of Reaction Networks with One-Dimen…
We study the response properties of d-dimensional hypercubic excitable networks to a stochastic stimulus. Each site, modelled either by a three-state stochastic susceptible-infected-recovered-susceptible system or by the probabilistic…
Stochastic reaction networks is a powerful class of models for the representation a wide variety of population models including biochemistry. The control of such networks has been recently considered due to their important implications for…
Power law systems have been studied extensively due to their wide-ranging applications, particularly in chemistry. In this work, we focus on power law systems that can be decomposed into stoichiometrically independent subsystems. We show…
In this paper I show that, for a class of reaction networks, the discrete stochastic nature of the reacting species and reactions results in qualitative and quantitative differences between the mean of exact stochastic simulations and the…
We consider linear elimination of variables in steady state equations of a chemical reaction network. Particular subsets of variables corresponding to sets of so-called reactant-noninteracting species, are introduced. The steady state…
We prove that the steady state of a class of multidimensional reaction-diffusion systems is asymptotically stable at the intersection of unweighted space and exponentially weighted Sobolev spaces, and pay particular attention to a special…
Within a fully microscopic setting, we derive a variational principle for the non-equilibrium steady states of chemical reaction networks, valid for time-scales over which chemical potentials can be taken to be slowly varying: at…
We develop a general classification of the nature of the instabilities yielding spatial organization in open nonideal reaction-diffusion systems, based on linear stability analysis. This encompasses dynamics where chemical species diffuse,…
We study stationary distributions in the context of stochastic reaction networks. In particular, we are interested in complex balanced reaction networks and reduction of such networks by assuming a set of species (called non-interacting…
We show that weakly reversible mass-action systems can have a continuum of positive steady states, coming from the zeroes of a multivariate polynomial. Moreover, the same is true of systems whose underlying reaction network is reversible…
We consider the stability problem for a unitary N+1 fermionic model, i.e., a system of $N$ identical fermions interacting via zero-range interactions with a different particle, in the case of infinite two-body scattering length. We present…
It is known that, in an $(m \otimes n)$-dimensional quantum system, the maximum dimension of a subspace that contains only entangled states is (m-1)(n-1). We show that the exact same bound is tight if we require the stronger condition that…
It has recently been shown that structural conditions on the reaction network, rather than a 'fine-tuning' of system parameters, often suffice to impart 'absolute concentration robustness' on a wide class of biologically relevant,…
This paper develops the concept of decomposition for chemical reaction networks, based on which a network decomposition technique is proposed to capture the stability of large-scale networks characterized by a high number of species, high…
We study an extended system that without noise shows a spatially homogeneous state, but when submitted to an adequate multiplicative noise, some "noise-induced patterns" arise. The stochastic resonance between these structures is…
We study complex networks of stochastic two-state units. Our aim is to model discrete stochastic excitable dynamics with a rest and an excited state. Both states are assumed to possess different waiting time distributions. The rest state is…
In this paper, the Turing instability in reaction-diffusion models defined on complex networks is studied. Here, we focus on three types of models which generate complex networks, i.e. the Erd\H{o}s-R\'enyi, the Watts-Strogatz, and the…
It is known that exact traveling wave solutions exist for families of (n+1)-states stochastic one-dimensional non-equilibrium lattice models with open boundaries provided that some constraints on the reaction rates are fulfilled. These…
We study the stationary states of networks consisting of weakly coupled bistable units. We prove the existence of a high multiplicity of stable steady states in networks with very general inter-unit dynamics. We present a method for…
The behavior of some stochastic chemical reaction networks is largely unaffected by slight inaccuracies in reaction rates. We formalize the robustness of state probabilities to reaction rate deviations, and describe a formal connection…